Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00524 ATGGGAAAGAGAACGAAACCAGTTTCAGAGTATCTAAATGCTCTCTCATTGTTTTGTTTATATTGCAGAGTAGTGATTTCTGCAAAGCACAACACTGGAGCAGGTGTAGTCCCAGGCAAAATCAATGTTCATCTTGTTCCACATTCCCATGATGATGTTGGTTGGCTCAAAACTGTTGACCAATACTATGTTGGATCAAACAGAACTATTCAGGTGGCATGTGTTGAGAATGTGCTGGACTCTGTGGTTATGTCACTGCAGAAGGACCCAAATAGGAAATTTGTGTTTGCTGAAATGGCATTTTTCAATAGATGGTGGGTAGAACAAAATCAAGAGACACAAGCAATAGTGAGAAAGCTTGTGGATGCAGGGCAGCTAGAATTCATAAACGGTGGTTGGTGCATGCATGATGAAGCAACCACCCATTACATAGACATGATTGATCAAACTACATTTGGTCATCTCTTCATCAAGAAACACTTCAACAAGGTCCCTCGAGCCGGGTGGCAGATTGATCCATTTGGGCATTCTGCTGTTCAAGCTTATCTCCTTGGTGCTGAGCTTGGGTTTGAATCTCTACACTTTGCTAGGATTGATTATCAGGATAGAGATAAGCGAAAAGTTGATAAATCTCTCGAAGTTGTGTGGCGTGGATCCAAAACATTTGAATCTTCAGCACAGATTTTTGCCAATGCTTTTCCGGTTCATTATAGTCCACCAGCAGGTTTTCATTTTGAAATCGATGATACCTATGATCCCATCCAGGATGATCCTCATCTATTTGATTACTATGTTAAAGATCGAGTTGAGGACTTCATTGCTGCTGCTGTTGCACAAGCAAATGTGACTAGAACAAACCATGTTATGTGGACAATGGGCGATGATTTCCAATACCAATATGCAGAAACTTGGTTCAAGCAAATGGATAAACTAATTCACCATGTTAATAAGGATGGCAGAGTGAATGCTTTGTATTCTACACCATCACTTTACACTGATGCTAAAAATGCAGCAAACCAATCATGGCCTCTGAAAACTGACGACTACTTTCCGTATGCAGATAGAGTAAATGCTTATTGGACAGGATATTTCAGCAGTCGCCCTGCATTTAAGAGATATGTTAGGATGCTGAGTGGATACTACTTGACAGCGCGTCAACTTGAATTCTTGGCTGGAAAGAAAACCACAGTAAGCCAGATTTATGACCTTGGAGATGCTCTAGCAATTGCACAGCATCATGATGCTATTTCTGGTACTGCCAAGCAGCATACAACTAATGACTACATGAAAAGGCTCGCTATTGGAGCATCTAAGGCTGAAGCTGTCATTAGTTCTTCTTTGGCTAATCTTGCTAGCAAGAATCCTGGAGTTCATCACTCAACACCTGCATCGGTATTTTCCCAGTGTCAACTACTCAATATCAGTTACTGCCCACCAACATCAGACAATAATCTTCAAGGAAAAAGTTTGGTGTTAGTGGTATATAATCCACTTGGATGGAATCGTTCTGATATTATCAGAATACCAGTTAATGATGCTAATCTTGTTGTCGAAGATTCGTTCGGGAATAAGGTGTCAGTGCCTCCTCTTGGATGGACTACATACTTCATTTCTAGAGCACTGGGAAAAGGCAAAGGTAGAAATGGATTTGTCTCATCACATTCAATCATTCAGAAAAACAAGACCATTGAATTAGGACCCGGAAATTTGAAGATGTCCTTTTCTTCCAAGTCTGGAAAACTTGAAAGGATGTATAATTCAAGAACTGGAGTTGATATACCAATTCAGCAAAGCTATCTCTGGTATGGCTCTAGCGACGAGTCGGATCAGGCTTCTGGTGCATATATATTCCGGCCTAATGGATCCTCTCCAAGTATTGTTTCAAGATCAGTGTCCTACAAGGTAGTTCAAGGACCACTAGTTCATGAGGTACATCAGAATATTAGTTCTTGGATTTACCAGGTCACTAGGCTCTACATAGATAAAGAGCATGCTGAAGTTGAATACACTATTGGTCCAATTCCCACAGATGATGAAGTTGGGAAAGAGGTGATCACACAAATGACATCAAATATGGTTACAAACAAGGAATTTTATACTGATTCTAATGGAAGAGATTTTCTCAAACGGGTTCGAGGTTATAGGGAAGATTGGCCCCTTGAAGTTAATCAACCTGTAGCAGGAAACTATTATCCACTTAATTTAGGAATTTATATTAAGGATAAGAAGTCTGAATTCTCAGTCCTAGTTGATCGTGCCACTGGTGGCGCGAGCATTAGAGATGGTGAGGTGGAACTAATGCTTCATAGGCGCATGCTCACCGAGGATGGCAGAGGAGTAGGCGAATCACTTGATGAACAAGTTTGCATAGATGATAAATGCCAAGGGCTAACAGTAAGAGGAAACTATTACATGGGCATCCACAAACTAGGAGATGGTTCCCGGTGGCGCCGTTCAACTGGTCAGGAAGTTTACTCCCCACTCTTATTGGCTTTTACACACGAGAACATAGGAAATTGGAAGTCCTCATATTTGAGCAAAGGAACTTTGATGGACCCAAATTACAGCTTGCCTCCCAATGTTGCTTTGATAACTCTTGAGGAATTGGATGATGGCAGTGTGCTCCTCCGTTTGGCACATCTATATGAGCAAGGTGAAGATGCTCACTATTCAAGTTTGGCCAAAGTTAAATTGAAGAGAATGTTTGCCTCAAAAAAGATAAAGGAATTAAAGGAGGTTAGTTTATCAGCAAACCAAGAGAAGTCAAACATGAAGAAGAAGACATGGAAGGTTGAGGGCGACAAGGGGCAACAACCACCACCACCACTTAAAGGTGGACCTGTTAACAGTTTCCATCTTCTTGTTGAGCTTGGCCCCATGGAAATACGTACATTCCTCTTGAAATTTTGA 2910 0.4113 MGKRTKPVSEYLNALSLFCLYCRVVISAKHNTGAGVVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNRTIQVACVENVLDSVVMSLQKDPNRKFVFAEMAFFNRWWVEQNQETQAIVRKLVDAGQLEFINGGWCMHDEATTHYIDMIDQTTFGHLFIKKHFNKVPRAGWQIDPFGHSAVQAYLLGAELGFESLHFARIDYQDRDKRKVDKSLEVVWRGSKTFESSAQIFANAFPVHYSPPAGFHFEIDDTYDPIQDDPHLFDYYVKDRVEDFIAAAVAQANVTRTNHVMWTMGDDFQYQYAETWFKQMDKLIHHVNKDGRVNALYSTPSLYTDAKNAANQSWPLKTDDYFPYADRVNAYWTGYFSSRPAFKRYVRMLSGYYLTARQLEFLAGKKTTVSQIYDLGDALAIAQHHDAISGTAKQHTTNDYMKRLAIGASKAEAVISSSLANLASKNPGVHHSTPASVFSQCQLLNISYCPPTSDNNLQGKSLVLVVYNPLGWNRSDIIRIPVNDANLVVEDSFGNKVSVPPLGWTTYFISRALGKGKGRNGFVSSHSIIQKNKTIELGPGNLKMSFSSKSGKLERMYNSRTGVDIPIQQSYLWYGSSDESDQASGAYIFRPNGSSPSIVSRSVSYKVVQGPLVHEVHQNISSWIYQVTRLYIDKEHAEVEYTIGPIPTDDEVGKEVITQMTSNMVTNKEFYTDSNGRDFLKRVRGYREDWPLEVNQPVAGNYYPLNLGIYIKDKKSEFSVLVDRATGGASIRDGEVELMLHRRMLTEDGRGVGESLDEQVCIDDKCQGLTVRGNYYMGIHKLGDGSRWRRSTGQEVYSPLLLAFTHENIGNWKSSYLSKGTLMDPNYSLPPNVALITLEELDDGSVLLRLAHLYEQGEDAHYSSLAKVKLKRMFASKKIKELKEVSLSANQEKSNMKKKTWKVEGDKGQQPPPPLKGGPVNSFHLLVELGPMEIRTFLLKF 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00524 969 Gene3D Glycoside hydrolase 38, N terminal domain 41 321 IPR027291 -
Arst5g00524 969 Gene3D Glycoside hydrolase family 38, central domain 401 455 IPR037094 GO:0004559|GO:0006013
Arst5g00524 969 MobiDBLite consensus disorder prediction 917 945 - -
Arst5g00524 969 Gene3D - 563 826 - -
Arst5g00524 969 SUPERFAMILY Families 57/38 glycoside transferase middle domain 358 458 IPR028995 -
Arst5g00524 969 SUPERFAMILY Glycoside hydrolase/deacetylase 34 354 IPR011330 GO:0005975
Arst5g00524 969 Coils Coil 907 927 - -
Arst5g00524 969 FunFam Alpha-mannosidase 564 826 - -
Arst5g00524 969 CDD GH38N_AMII_LAM_like 41 317 - -
Arst5g00524 969 FunFam Alpha-mannosidase 41 321 - -
Arst5g00524 969 Pfam Glycosyl hydrolases family 38 C-terminal domain 566 778 IPR011682 GO:0004559|GO:0006013
Arst5g00524 969 FunFam Alpha-mannosidase 320 400 - -
Arst5g00524 969 FunFam Alpha-mannosidase 846 969 - -
Arst5g00524 969 Gene3D - 468 527 IPR013780 -
Arst5g00524 969 FunFam Alpha-mannosidase 401 456 - -
Arst5g00524 969 Pfam Alpha mannosidase middle domain 358 450 IPR015341 GO:0004559|GO:0006013
Arst5g00524 969 Gene3D - 850 969 - -
Arst5g00524 969 Gene3D Glycoside hydrolase family 38, central domain 322 400 IPR037094 GO:0004559|GO:0006013
Arst5g00524 969 PANTHER ALPHA-MANNOSIDASE 27 969 - -
Arst5g00524 969 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 353 IPR000602 GO:0004559|GO:0006013
Arst5g00524 969 SUPERFAMILY Galactose mutarotase-like 465 969 IPR011013 GO:0003824|GO:0005975|GO:0030246
Arst5g00524 969 PANTHER ALPHA-MANNOSIDASE 27 969 - -
Arst5g00524 969 SMART Alpha_mann_mid_2 358 432 IPR015341 GO:0004559|GO:0006013
Arst5g00524 969 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 860 966 IPR041147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00524 Arst-Chr5 4372335 4378519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00524 12 915 Glycoside Hydrolase AT3G26720 56.768 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00524 K01191 - gmx:100806748 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00524 5 4372335 4378519 Arst1g01061 1 10581966 10592410 PCT