Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g3015 ATGAGGATCCACCGAGACGATGAAAATTTGAGGCAAAGACTGCGCCGAGCTATTGGAGGCTTTGGGGAAGGTGGTGTTGGCGGTAGAAGAGGAAGAGGAAATGGTGGCATTGGTGGAAGAATAGGTTGGGGTTCAAAATATGGTGGGGGCTTTGAAGGAGGGCAGAAAAAACGGGGATATAGAGCAGACTGGTATGTATGCCACTCGGCTGCTCAAAGCCGTGTCTTCAATCTCTGTGTGAATGCAAAGGAGCTATCAAACAATAAGCGCCCACTGGAAGAAGACGAAAAACAAGCTATGCCAAGAATGTCATCCAGACTTTCAGATGATCCCGAGCAAGGCCAAGGTAATGGCCAAAATGGTGCAGCTGCGGAGTCTAAATCAAGTTTGCTTATTCCCGAACTTGGTTGGGATTTGTCAGTCTATTGTCTCGCACGTTTGCGGAGGTGTGATTATGGCTCAATTGCCTCATTGAACCGTAGTTTTCTATCTCTCGTTCGGAAAGGAGAACTGTATTCTCTTAGGCGAAAATTAGGTATTGTAGAATATTGGGTTTATTTCTCGTGCAATATCCTTGAATGGGAGGCATTTGATCCGAATAGTGGCCGTTGGATGCACTTGCCTAAAATGGTTTCTAATGAATGCTTTATGTGTTCAGATAAGGAGTCGTTGGCTGTTGGTGTGGAACTTCTTGTTTTTGGGAAGGAAATTATGGCTCCTATCATTTATAAGTACAGCATTTTGACGAACAGCTGGTCATTTGGTAAAGAAATGAATACTCCTAGATGCTTATTCGCTTCTGCCAGCCTTGGAGCAATTGCCATATTGGCTGGTGGTTGTGATCCACAGGGCAACATCTTGAGTGCAGCTGAGCTTTATGACTCACTTACTGGAACATGGGAGACTCTTCCAAACATGAATAAAGCAAGGAAAATGTGTTCTGGTATTTTTATGGATGGGAAATTTTATGTCCTTGGCGGGATTGCAGAAGGTAACACAAAGCAGCTAACATGTGGTGAGGAGTTTGATTTGAAGACAAGAACATGGCGTGAAATACCTGACATGTTCTCTCCACGAAGTGGAGAAGCAAGGGTGAATGGGATACTACCTGCAACTGCTGAGGCACCCCCTTTGGTTGCAGTTGTAAATAATGTATTGTATGCTGCAGATTATGCACAGCAGGAGGTAAGGAGGTATGTCAAAGAGAGTAATTCATGGGTCACCATGGGAGGACTTCCTGAGGGAGTATCGTCTGTATATGGCTGGGGATTAGCATTTCGGGCATGTGGAGATCAACTAATAGTTATTGGTGGGCCTAGTACTCTTGGCGAAAGGATGATTGAAATTCATGGTTGGGTCCCAGATGAAGGTGCACCACAATGGAATCTGCTTGGCAGAAAGAAATCAGGGAGCTTTGTGTATAATTGCACAGTGATGGGATGCTGA 1446 0.4481 MRIHRDDENLRQRLRRAIGGFGEGGVGGRRGRGNGGIGGRIGWGSKYGGGFEGGQKKRGYRADWYVCHSAAQSRVFNLCVNAKELSNNKRPLEEDEKQAMPRMSSRLSDDPEQGQGNGQNGAAAESKSSLLIPELGWDLSVYCLARLRRCDYGSIASLNRSFLSLVRKGELYSLRRKLGIVEYWVYFSCNILEWEAFDPNSGRWMHLPKMVSNECFMCSDKESLAVGVELLVFGKEIMAPIIYKYSILTNSWSFGKEMNTPRCLFASASLGAIAILAGGCDPQGNILSAAELYDSLTGTWETLPNMNKARKMCSGIFMDGKFYVLGGIAEGNTKQLTCGEEFDLKTRTWREIPDMFSPRSGEARVNGILPATAEAPPLVAVVNNVLYAADYAQQEVRRYVKESNSWVTMGGLPEGVSSVYGWGLAFRACGDQLIVIGGPSTLGERMIEIHGWVPDEGAPQWNLLGRKKSGSFVYNCTVMGC* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g3015 481 MobiDBLite consensus disorder prediction 90 123 - -
Apr9g3015 481 Pfam Kelch motif 309 355 IPR006652 GO:0005515
Apr9g3015 481 Pfam Kelch motif 261 307 IPR006652 GO:0005515
Apr9g3015 481 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 87 481 - -
Apr9g3015 481 MobiDBLite consensus disorder prediction 108 123 - -
Apr9g3015 481 SUPERFAMILY Kelch motif 191 478 IPR015915 GO:0005515
Apr9g3015 481 Gene3D - 175 478 IPR015915 GO:0005515
Apr9g3015 481 SMART kelc_smart 321 367 IPR006652 GO:0005515
Apr9g3015 481 SMART kelc_smart 273 320 IPR006652 GO:0005515
Apr9g3015 481 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 87 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g3015 Apr-Chr9 36997479 37009621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g3015 119 353 Miscellaneous Gene Families AT4G33900 26.531 2.81e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g3015 - - gmx:100788507 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0903 1 12318472 12321507 Apr9g3015 9 36997479 37009621 ECH
Apr9g3015 9 36997479 37009621 Apr9g3015 9 36997479 37009621 ECH
Apr7g1489 7 21984297 21987511 Apr9g3015 9 36997479 37009621 PCT