Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1489 ATGTTGGACGGTCGCTCCTGCGTTGTTCCGAGGTTGTTTTCCGGCTCTTGCCAGGCTGCTGAAAACGACTGGTCTTACATGAAGTACCTGTTGGATTTGGACATCAAAAATGGCAAGCGCCCTATGGAGATTGACGATGAGGATGATGAGCCCCAGCCAAGGAAGTGTACTAAGAAGTTGGATTCTTGCCATATAGTTGAAACCACTCGAATATCGCTTCAACAGCAATCCTTTGAGGCCAGGGATTCTGTTGTTTCCCCAATGGATCAGGAGACCATTGAGCCATTGAGTGTTTGTCAAAGGGTTGGAGAAGATGAGGATTTGACTGACCGGCTATCGGGCGAGCAAGAACTGAAGGATGATGGCAATTTGATGGATTCTGGTGACCATCAATCTGATAAACAGCAGCAGGGTCAGCCTGGGGATTCATCTGATTCTGATGTTCAGTTACCTGATGAACAGAAGTTGCGGCACGATGTGAATTTATTGAATTCAAGTGACCAGCAATCTGAGGAGCAGCAGCAGCATGCTGGGGATTCATCGGATTCTGGTTCTCTTTTGCCACGCATGAACCGTGACAGCTCAATCGCCTGTCTCAGCCGCTGCTCAAGGTCTGATTATGGTTCTCTTGCCTCACTAAATAGGAGCTTCCGCAACATAATCCGAAGTGGTGAGCTCTATACGTGGAGGAGACTAAATGGCATCATGGAACACTGGATTTATTTTTCCTGTGCCCTCCTTGAGTGGGAGGCCTATGATCCAATTCGCCAGCGGTGGATGCATTTGCCTAGGATGGCTTCTAATGAATGCTTCATGTGTTCAGATAAGGAATCTCTAGCTGTAGGTACTGAGCTTCTTGTGTTTGGGAGGGAGCTGAGATCCCATGTCATTTACAGATACAGTCTCTTGACAAATTCATGGACTTCTGGAATGAGAATGAATGCTCCAAGATGCTTGTTTGGCTCTGCTAGCCTTGGAGAGATTGCAATATTGGCTGGTGGGTGTGATTCAGAGGGACACATCCTTGACTCTGCTGAACTATACAACTCCGAGACTCAAACATGGGAAACACTCCCAAGTATGAAAAAACCCAGGAAAATGTGCTCTGGGGTGTTTATGGATGGAAAGTTTTATGTTATTGGGGGGATTGGGGGAAGTGATTCCAAGCTTCTCACTTGTGGAGAGGAATACAATTTACAGACTAGAACATGGACAGAGATTCCTAACATGTCCCCTGGACGTTGTACTAGGGGGTCTGAGATGCCTGCCACGGCCGAGGCACCACCGCTGGTTGCTGTTGTAGATAATGAACTGTATGCTGCTGATTATGCTGACATGGAGGTTAAGAAATATGACAAGGAGAGAAAATTGTGGCTTACCATTGGGAGACTGCCTGAACGAGCAGTGTCGATGAATGGCTGGGGTCTTGCATTCCGGGCATGTGGAAATAGGCTTATTGTCATTGGTGGACCTAGGACTCATGGTGAGGGTTTTATTGAACTCAATTCTTGGGTGCCTAGTGAAGGACCTCCACAGTGGGATCTACTTGCTAGAAAACGTTCTGGTAACTTTGTCTATAATTGTGCTGTGATGGGATGCTGA 1602 0.47 MLDGRSCVVPRLFSGSCQAAENDWSYMKYLLDLDIKNGKRPMEIDDEDDEPQPRKCTKKLDSCHIVETTRISLQQQSFEARDSVVSPMDQETIEPLSVCQRVGEDEDLTDRLSGEQELKDDGNLMDSGDHQSDKQQQGQPGDSSDSDVQLPDEQKLRHDVNLLNSSDQQSEEQQQHAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRLNGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSETQTWETLPSMKKPRKMCSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEIPNMSPGRCTRGSEMPATAEAPPLVAVVDNELYAADYADMEVKKYDKERKLWLTIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWDLLARKRSGNFVYNCAVMGC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1489 533 SMART kelc_smart 284 327 IPR006652 GO:0005515
Apr7g1489 533 SMART kelc_smart 376 424 IPR006652 GO:0005515
Apr7g1489 533 SMART kelc_smart 328 375 IPR006652 GO:0005515
Apr7g1489 533 MobiDBLite consensus disorder prediction 166 188 - -
Apr7g1489 533 Gene3D - 241 518 IPR015915 GO:0005515
Apr7g1489 533 MobiDBLite consensus disorder prediction 118 151 - -
Apr7g1489 533 MobiDBLite consensus disorder prediction 129 147 - -
Apr7g1489 533 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 533 - -
Apr7g1489 533 SUPERFAMILY Kelch motif 246 529 IPR015915 GO:0005515
Apr7g1489 533 Pfam Kelch motif 364 411 IPR006652 GO:0005515
Apr7g1489 533 Pfam Kelch motif 316 361 IPR006652 GO:0005515
Apr7g1489 533 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1489 Apr-Chr7 21984297 21987511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1489 193 426 EF-hand Containing Proteins AT4G39560 26.496 8.96e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1489 - - gmx:100818865 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1489 7 21984297 21987511 Apr7g1489 7 21984297 21987511 ECH
Apr7g1489 7 21984297 21987511 Apr9g3015 9 36997479 37009621 PCT