Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1871 ATGAACCTTGAAGCTATGGATGAGGAATCATTAGAGAACTCGCTCTTGATTCCAAGCTTTTCTTCCCGCAATGTGTTAGGAGAACACCCTCTTAGGAGAACAGGTAATGTGTGGAGCGCGGTGGCACACATAATAACAGGCGTGATAGGAGCAGGGGTGCTGTCTCTAGCATGGTCTGTGGCACAGTTGGGGTGGATTGTTGGTCCCATCCTCACTATACTCTTTGCATTCAGCACCTTTTTTTCAACCTACCTTCTTTCTGACTGCTACAGATACCCTCATCCTCAACATGGCACCATTAGAAGCACCTCCTACATGGATGCTGTTAAGATTTATTTGGGAGAGATAAGGCGCAAGGTGTGTGGAGTGCTAGTGTTTGTGAGCTTATATGGGACTGCCACAGCCTATGTCATTACGTCTGGTACATGCATCAGAGCGATTCTGAAATCAAATTGTTATCACAAGGAAGGGCATGATGCTCCTTGTAACTATGGGGATTCCATGTACATGGCGATTTTTGGCGTTGTTGAGATCGTAATGTCATTCATACCAGATCTCCACAACATGGCATGGGTTTCAGTTGTTGCAGCCATAATGTCCTTTTCATACTCATCTATTGGTTTAGGACTTGGCATCAAAACAGTAGTAGAAAATGGAACAATTATGGGAAGTGTAACAGGAGTACCAACTTCAAATATAGCTGACAAGTTATGGTTAGCTTTCCAAGCACTTGGTGATATTGCCTTTGCCTATCCATTCACAGTTATCCTCCTTGAAATACAGGATACTTTAGAGTCTCCTCCCCCAGAAAATAAGACCATGAAAAAGGCCTCCATGATTGCTATCCTCATCACAACATTCTTCTACCTATGCTGTGCATGCTTTGGATATGCAGCTTTTGGAGATCAAACACCAGGAAACCTCTTGACAGGATTTGGATTTTACGAGCCTTACTGGCTCATTGACTTTGCTAATGCTTGCATCGTGCTTCATTTGGTGGGAGGGTATCAGATTTACAGTCAGACAATATATGGTGCTGCTGACAGATGGGGTGCAAGAAAATACCCCAACAGTGACTTTGTGAATAATTTGTACCAACTGAAACTGCCTTTATTACCAGCTTTTCAGATAAACATGTTCAGGTTATGTTTTCGAACAGCCTATGTGATTTCCACAACTGGACTTGCAATCCTATTTCCTTACTTCAATCAGGTCCTGGGAGTGTTGGGAGCCTTAAGCTTTTGGCCATTGGCTATATATTTCCCAGTAGAGATGTACTTTGTGCAGAAGAAAATTGAAGCTTGGTCTAGCAAATGGATTGTCCTTCGGGTATTTAGCTTTGTTTGTTTGCTAATGTCATTACTGGGTCTAGTTGGATCGCTTGAAGGAATCATAAGCCAGAAACTTAGCTGA 1413 0.4275 MNLEAMDEESLENSLLIPSFSSRNVLGEHPLRRTGNVWSAVAHIITGVIGAGVLSLAWSVAQLGWIVGPILTILFAFSTFFSTYLLSDCYRYPHPQHGTIRSTSYMDAVKIYLGEIRRKVCGVLVFVSLYGTATAYVITSGTCIRAILKSNCYHKEGHDAPCNYGDSMYMAIFGVVEIVMSFIPDLHNMAWVSVVAAIMSFSYSSIGLGLGIKTVVENGTIMGSVTGVPTSNIADKLWLAFQALGDIAFAYPFTVILLEIQDTLESPPPENKTMKKASMIAILITTFFYLCCACFGYAAFGDQTPGNLLTGFGFYEPYWLIDFANACIVLHLVGGYQIYSQTIYGAADRWGARKYPNSDFVNNLYQLKLPLLPAFQINMFRLCFRTAYVISTTGLAILFPYFNQVLGVLGALSFWPLAIYFPVEMYFVQKKIEAWSSKWIVLRVFSFVCLLMSLLGLVGSLEGIISQKLS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1871 470 PANTHER OS05G0424000 PROTEIN-RELATED 11 469 - -
Apr9g1871 470 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 11 469 - -
Apr9g1871 470 Pfam Transmembrane amino acid transporter protein 34 465 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1871 Apr-Chr9 27395297 27401739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g1871 18 465 Organic Solute Cotransporters AT5G09220 49.889 1.80e-173 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1871 K24917 - gmx:100786621 731.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1871 9 27395297 27401739 Apr9g1871 9 27395297 27401739 ECH
Apr10g1735 10 30239847 30263422 Apr9g1871 9 27395297 27401739 PCT
Apr9g1871 9 27395297 27401739 Apr10g1734 10 30224431 30228727 PCT