Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1734 ATGGATATGAAAAACTCTCTACAGATAAGTAGAAGTGGTACCGGTGCTTATGATGATGATGGACATGCCAAAAGGACAGGAAATTTAAGGAGTGGTGTGGCTCATATCATTACTGCTGTTATTGGTTCTGGTGTTTTGTCTCTTGCATGGAGCACTTCCCAGTTAGGATGGATTGGAGGGCCATTTGCCTTACTTTGTTGTGCAATTGTCACATATATTTCTTCATTCCTCCTATCTGATTGTTACAGAACTCCTGATCCTGTCACTGGGAAAAGAAACTACTCTTACATGGATGCTGTTAGAGTTTACCTTGGTAATAAAAGGACATATGTAGCTGGGTTCCTTCAATTTTTGACCTTGTATGGGACTTGTATCGCTTATGTACTTACAACAGCAACTAGTCTGAGTGCAATTCTGAAATCAAATTGTTATCACAAGAAAGGACATGAGGCTCCTTGTAATTATGGGGGTAATTTGTATATGGCACTATTCGGACTTGTTCAGATTCTAATGTCATTCATACCGGATCTCCACAACATGGCATGGGTTTCAGTTGTTGCAGCGCTTATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATAGCCACAGTCATACAAAATGGAACAATTATGGGAAGTTTGACAGGAATACCAACAGATAAAATTGCTGACAAATTCTGGTTAATCTTCCAAGCACTTGGTGACATTGCCTTTGCCTATCCATACTCCATTATCCTTCTTGAGATACAGGACACTCTAGAGTCTCCTCCACCAGAAAATCAGACCATGAAAAAGGCCTCCATGGTTGCAATATTTATTACAACATTCTTCTACCTATGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGATACTCCCGGAAACCTCTTGACAGGGTTTGGATTTTTTGAGCCTTATTGGCTTATTGACCTTGCTAATGCTTGCATCATTCTTCATTTGGTGGGAGGATATCAGATTTACAGCCAACCAATATATAGTGCTGCTGATAGATGGTGTTCAAGAAAATTCCCAAACAGTGGCTTTGTGAATAACTTCTACAAAGTGAAACTACCTTTGCTACCTAGTTTTCAGCTAAATCTTTGGAGGTTCTGTTTTAGAACAGCCTATGTGATTTCAACAACTGGAGTTGCAATCTTATTTCCTTACTTCAACCAAGTTCTTGGAGTGTTAGGAGCTGTAAACTTCTGGCCATTGGCTATATATTTCCCAGTAGAGATGTACTTTGTACAGAAGAAAATTGCACCTTGGAGTAGCAAATGGATTGTTCTAAGAACATTCAGCTTTGCTTGTTTTCTTGTAACAGTAATGGGATTGGTTGGATCACTAGAAGGAATCATACGTGCGAAAATTAACTGA 1386 0.3939 MDMKNSLQISRSGTGAYDDDGHAKRTGNLRSGVAHIITAVIGSGVLSLAWSTSQLGWIGGPFALLCCAIVTYISSFLLSDCYRTPDPVTGKRNYSYMDAVRVYLGNKRTYVAGFLQFLTLYGTCIAYVLTTATSLSAILKSNCYHKKGHEAPCNYGGNLYMALFGLVQILMSFIPDLHNMAWVSVVAALMSFTYSFIGLGLGIATVIQNGTIMGSLTGIPTDKIADKFWLIFQALGDIAFAYPYSIILLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGNDTPGNLLTGFGFFEPYWLIDLANACIILHLVGGYQIYSQPIYSAADRWCSRKFPNSGFVNNFYKVKLPLLPSFQLNLWRFCFRTAYVISTTGVAILFPYFNQVLGVLGAVNFWPLAIYFPVEMYFVQKKIAPWSSKWIVLRTFSFACFLVTVMGLVGSLEGIIRAKIN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1734 461 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 4 459 - -
Apr10g1734 461 Pfam Transmembrane amino acid transporter protein 26 456 IPR013057 -
Apr10g1734 461 MobiDBLite consensus disorder prediction 1 21 - -
Apr10g1734 461 PANTHER OS05G0424000 PROTEIN-RELATED 4 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1734 Apr-Chr10 30224431 30228727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1734 6 443 Organic Solute Cotransporters AT1G77380 53.741 1.49e-180 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1734 K24917 - gmx:100781077 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1871 9 27395297 27401739 Apr10g1734 10 30224431 30228727 PCT