Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1735 ATGGTTATCAACAACTCTCTCCCAAAGACTATAACTGCAACTGATTCCGGTGACTATGATGACGATGGGAAAGCGAAAAGGACTGGAACTTTATGGAGTGGCGTGGCTCATATCATTACTGCTGTTATTGGTTCTGGTGTTCTATCTCTTGCATGGAGCACTTCTCAATTAGGATGGATTGGAGGGCCGTTTGCATTGTTTTGTTTTGCAATTATCACGTATATTTCTTCATGCCTCCTTTCTGATTGTTATAGAACTCCTGATCCTGTCACTGGAAAAAGAAACTACTCATACATTGCTGCTGTTACAACTAATCTTGGTGAGAAAAGGGCATGGATGGCTGGTTTAATTCAATATTTGTCCTTGTATGGAACTGGTTGTGCTTATGTACTTACCACTGCAAATAGTCTTAGAGCTATTCTGAAAGCAAAATGTTACCACCAAGAAGGGCATCAAGCTCCTTGTATTTACGGGGGTAATATGTATATGGTGGTGTTTGGACTTGTTCAGATTGTAATGTCATGCATCCCGGATCTCCACAACATGGTGTGGGTTTCAGTTGTTGCAGCAATTATGTCCTTTGCATACTCATTCATTGGACTAGGACTTGGCATAGCAAAAGTCATAGAAAATGGAAGAATTATGGGGAGCATAACAGGAATACCAGCTTCCAACATTCCTAACAAGTTATGGTTAGTCTTCCAAGCACTTGCTGATATTGCCTTTGCCTATCCATACTCAATGGTCCTTCTTGAGATACAGGATACTCTAGAGTCCCCTCCACCAGAAAATCAAACCATGAAGAAGGCCTCTATGCTTGCAATCTTTATTACAACATTCTTCTACCTATGCTGTGGATGCTTTGGATATGCAGCTTTTGGAAATGATTCACCAGGAAACCTCTTGACAGGGTTTGGGTTTTATGAGCCTTTTTGGCTTGTTGCCTTTGCTAATGCTTGCATTATAATTCATTTGGTGGGAGGATATCAGATTTACAGCCAACCAATATATAGTGCTGCTGATAGATGGTGTTCAAGAAAATTCCCAAACAATGGCTTTGTGAATAACTTCTACAAAGTGAAGCTACCTTTGCTACCTGGTTTTCAGCTAAATCTTTGGAGGTTCTGTTTTAGAACAGCCTACGTGATTTCAACAACTGGAGTTGCAATTTTGTTTCCTTACTTCAACCAAGTTCTTGGAGGGTTAGGAGCCGTAAACTTCTGGCCATTGTCTATACATTTCCCAGTAGAGATGTACTTTGTTCAGAAGAAAATTGCACCTTGGAGTAGCAAATGGATTGTTCTAAGAACATTCAGCTTTGCTTGTTTTCTTGTAACACTAATGGGATTGGTGGGATCGATAGAAGGAATCATACGTGCGAAAATTAGCTGA 1392 0.403 MVINNSLPKTITATDSGDYDDDGKAKRTGTLWSGVAHIITAVIGSGVLSLAWSTSQLGWIGGPFALFCFAIITYISSCLLSDCYRTPDPVTGKRNYSYIAAVTTNLGEKRAWMAGLIQYLSLYGTGCAYVLTTANSLRAILKAKCYHQEGHQAPCIYGGNMYMVVFGLVQIVMSCIPDLHNMVWVSVVAAIMSFAYSFIGLGLGIAKVIENGRIMGSITGIPASNIPNKLWLVFQALADIAFAYPYSMVLLEIQDTLESPPPENQTMKKASMLAIFITTFFYLCCGCFGYAAFGNDSPGNLLTGFGFYEPFWLVAFANACIIIHLVGGYQIYSQPIYSAADRWCSRKFPNNGFVNNFYKVKLPLLPGFQLNLWRFCFRTAYVISTTGVAILFPYFNQVLGGLGAVNFWPLSIHFPVEMYFVQKKIAPWSSKWIVLRTFSFACFLVTLMGLVGSIEGIIRAKIS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1735 463 Pfam Transmembrane amino acid transporter protein 27 458 IPR013057 -
Apr10g1735 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 11 461 - -
Apr10g1735 463 PANTHER OS05G0424000 PROTEIN-RELATED 11 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1735 Apr-Chr10 30239847 30263422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1735 1 445 Organic Solute Cotransporters AT1G77380 50.993 3.08e-175 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1735 K24917 - gmx:100816934 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1735 10 30239847 30263422 Apr9g1871 9 27395297 27401739 PCT