Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1458 ATGCCTCTTTCTCTTTCACCCTCTCTTCCTCCCAAACCAAATTCAAGAAAGAGAAAGGGAACCCTCTTTCTCTTTATCACACAAACTACTCCAACTTGCATTACAAAAATATTAACCCAAAACCTCACACATATACATATACATGTTTGCACGAACCCCTTTAACATACCATCCATCGCATACCTAATATCTATAGGTTCGGTGGAGAGCAGAGAAATTAAGATAAATAAATTTTTATTATTTTTATTATATGTTTTCTTTTATCAACTGAAAATGCCTTGTTCTCTTCAGCTCCACCGTTTCAACCCCGCAACTGACGCATCAACCGCCATTGCTAACGCCGTTAACTACTCCAAACAGACGCCGTCAACGCGCCCTCTCGTGCCAGACGCGGTATCTCGCCATCACGGGCACGTGGTGGGGCCCAACCAGTGCTGCTCCGTCGTGATCCAACCCATCGACGCGCCCGTGTCTAGGGTGTGGCCCGTGCTTCGGCGCTTCGACAACCCGCAAGGTTACAAGCACTTCGTCAAGAGCTGCCACGTGGTCGCCGGCGACGGCATTCGCGTCGGCGCCCTACGCGAGGTCCGCGTCGTGTCCGGCCTCCCCGCCGGGTACAGCACGGAGCGCCTCGAGATCCTCGACGACGAGTGCCACGTCATCAGCTTCAGCGTTGTTGGCGGGGACCACCGCCTGAGGAACTACCGGTCGGTGACGACTCTGCACCGTGACGGTAACGAGGAGACAGTGGTCATCGAATCGTACGTCGTTGACGTACCGCCGGGAAACACTAAGGAAGAGACTTGCGTTTTCGTTGACACAATCGTACGGTGCAATTTACAGTCCCTGGCTCAGATCGCTGAAAACATTGCAAGTCAACACTGA 885 0.5209 MPLSLSPSLPPKPNSRKRKGTLFLFITQTTPTCITKILTQNLTHIHIHVCTNPFNIPSIAYLISIGSVESREIKINKFLLFLLYVFFYQLKMPCSLQLHRFNPATDASTAIANAVNYSKQTPSTRPLVPDAVSRHHGHVVGPNQCCSVVIQPIDAPVSRVWPVLRRFDNPQGYKHFVKSCHVVAGDGIRVGALREVRVVSGLPAGYSTERLEILDDECHVISFSVVGGDHRLRNYRSVTTLHRDGNEETVVIESYVVDVPPGNTKEETCVFVDTIVRCNLQSLAQIAENIASQH* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1458 294 CDD PYR_PYL_RCAR_like 145 288 - -
Apr9g1458 294 Pfam Polyketide cyclase / dehydrase and lipid transport 151 288 IPR019587 -
Apr9g1458 294 SUPERFAMILY Bet v1-like 145 286 - -
Apr9g1458 294 Gene3D - 106 294 IPR023393 -
Apr9g1458 294 PANTHER - 100 290 - -
Apr9g1458 294 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 100 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1458 Apr-Chr9 24186477 24187834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g1458 K14496 - gmx:100798803 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1458 9 24186477 24187834 Apr10g2148 10 34064013 34064685 ECH
Apr4g2073 4 29602013 29603028 Apr9g1458 9 24186477 24187834 ECH
Apr10g0781 10 19487412 19488602 Apr9g1458 9 24186477 24187834 ECH
Apr9g1458 9 24186477 24187834 Apr9g1458 9 24186477 24187834 ECH
Apr10g2148 10 34064013 34064685 Apr9g1458 9 24186477 24187834 PCT