Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2148 ATGCCTTCTTCTCTTCAGCTTGAGAGGTTCAATCCTACAACCGATGCCGCCACCACCGCCATCTTTAACTGCCCAAAGCAGCCTCAAACGCCGCCTCCCACTGCGGCGCGTCGTCTAGTGGTATCTCTCTCTTCCGGCAGAGGAATCGCAGTGCCGGACACAGTGGCACGCCACCACGCGCACGTGGCGGGGCCAAACCAGTGCTGCTCCGTCGTGACGCAACCCATTAACGCCCCCGTTTCCGCTGTGTGGCCGTTTGTAAGGCGCTTCGACTACCCGCAGGGCTATAAGAACTTCGTGAAGAGCTGTCACGTCATCACTGGCGACGGCATTCATGTCGGTGCCGTCCGCGAGGTCCGAGTTGTGTCCGGTCTCCCCGCCGAGTCGAGCACGGAGCGATTGGAGATTCTCGACGACGAGCGCCACGTCATCAGCTTTAGCGTCGTCGGCGGTGACCACCGGCTGAACAATTACCGGTCGGTGACGACCCTTCACGCTAACGGTAACGGAAACGGAACACTTGTCATCGAGTCATACGTCGTTGACGTGCCGCAAGGTAACACAAAGGAGGAAACTTGCGTGTTCGTCGACACAATCGTACGCTGTAATTTGCAGTCTTTGGCTCAGATCGCTGAGAATAGGACTTGA 648 0.5787 MPSSLQLERFNPTTDAATTAIFNCPKQPQTPPPTAARRLVVSLSSGRGIAVPDTVARHHAHVAGPNQCCSVVTQPINAPVSAVWPFVRRFDYPQGYKNFVKSCHVITGDGIHVGAVREVRVVSGLPAESSTERLEILDDERHVISFSVVGGDHRLNNYRSVTTLHANGNGNGTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENRT* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2148 215 Pfam Polyketide cyclase / dehydrase and lipid transport 68 212 IPR019587 -
Apr10g2148 215 PANTHER - 33 215 - -
Apr10g2148 215 Gene3D - 35 215 IPR023393 -
Apr10g2148 215 SUPERFAMILY Bet v1-like 67 211 - -
Apr10g2148 215 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 33 215 - -
Apr10g2148 215 CDD PYR_PYL_RCAR_like 68 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2148 Apr-Chr10 34064013 34064685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2148 K14496 - gmx:100808416 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1458 9 24186477 24187834 Apr10g2148 10 34064013 34064685 ECH
Apr4g2073 4 29602013 29603028 Apr10g2148 10 34064013 34064685 ECH
Apr10g0781 10 19487412 19488602 Apr10g2148 10 34064013 34064685 ECH
Apr10g2148 10 34064013 34064685 Apr10g2148 10 34064013 34064685 ECH
Apr10g2148 10 34064013 34064685 Apr9g1458 9 24186477 24187834 PCT