Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0781 ATGCCTCCAAATCCACCAAAGTCATCACTCCTCCTTCACCGGATCAACCACACCGCCGCCCTCGCCAACTGCCACGACCATCGTGGCTGTGACACTAACCTCGTGAAGCCCTTCGCCGCCGTCCCTGATGCCGTAGCCCGATACCATACCCACAACGTGGCGCCAAACCAGTGCTGCTCCGCGGTGGTGCAGGAGATCGCCGCCTCCGTCGCCACCGTGTGGTCCGTCGTGCGCCGCTTCGACAACCCGCAGGCCTACAAGCACTTCGTGAAGAGCTGCCACGTCATCGGCGGTGACGGCGACGTCGGCACGCTCCGTGAGGTCCACGTCATCTCTGGCCTACCGGCCGCTAGGAGCACCGAGCGCCTCGAGATTCTCGACGAGGAGCGCCACGTCATCAGCTTCAGCGTCGTCGGTGGGGACCACAGGCTCGCCAATTACCGCTCCGTCACCACCCTACACGCTGCCGGCGACGGTGCCGGCACCGTGGTGGTGGAGTCGTACGTGGTGGACGTGCCACCAGGGAACACGCGTGACGACACGCGCGTGTTCGTGGACACCATCGTGAGGTGCAACCTTCAGTCACTCGCGCAAACCGCTGAGAACTTGACGCAACGGAACAACGACACCGACGATTACAAGTGCTGTTCCTAA 654 0.633 MPPNPPKSSLLLHRINHTAALANCHDHRGCDTNLVKPFAAVPDAVARYHTHNVAPNQCCSAVVQEIAASVATVWSVVRRFDNPQAYKHFVKSCHVIGGDGDVGTLREVHVISGLPAARSTERLEILDEERHVISFSVVGGDHRLANYRSVTTLHAAGDGAGTVVVESYVVDVPPGNTRDDTRVFVDTIVRCNLQSLAQTAENLTQRNNDTDDYKCCS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0781 217 PANTHER - 29 208 - -
Apr10g0781 217 CDD PYR_PYL_RCAR_like 58 201 - -
Apr10g0781 217 Pfam Polyketide cyclase / dehydrase and lipid transport 60 201 IPR019587 -
Apr10g0781 217 Gene3D - 23 214 IPR023393 -
Apr10g0781 217 PANTHER ABSCISIC ACID RECEPTOR PYL4-LIKE 29 208 - -
Apr10g0781 217 SUPERFAMILY Bet v1-like 58 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0781 Apr-Chr10 19487412 19488602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0781 K14496 - gmx:100788199 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0781 10 19487412 19488602 Apr10g0781 10 19487412 19488602 ECH
Apr10g0781 10 19487412 19488602 Apr9g1458 9 24186477 24187834 ECH
Apr10g0781 10 19487412 19488602 Apr10g2148 10 34064013 34064685 ECH
Apr4g2073 4 29602013 29603028 Apr10g0781 10 19487412 19488602 ECH