Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0639 ATGGATTTCTTCGCTCCCCATTATTTCTCCATACACATTGCTCTCATCTGGGTTCTACTTTGCAGAGGTGCATCAGGAGCCACGTTTATTCTAATCAACAAGTGTGATTACACGGTGTGGCCTGGAATTTTGGCCAATGCGGGTAGCTCCGGATTGGACTCAACCGGGTTTGAGCTCCGACCCGGTGGGTCACGGAGCTTCCAAGTGCTGCCGAAATGGTCCGGAAGAATATGGGGCAGAACCGGGTGCAATTTTGACCCGAATACCCAACAGGGTAGCTGCACCACAGGAGATTGCGGTTCCAACCAGGTCCAATGTAATGGGGGTGGGGCAAGCCCACCCGCTACATTAGCCGAGTTCACAATCGGGTCGGGTACCCAAGACTTCTATGACGTGAGTCTAGTTGACGGGTACAATTTACCCATGATGGTGGACCCGAGTGGGGGATCGGGGACATGCGGGTCCACCGGGTGCGTTGCAGACCTTAACCAACGGTGCCCGAATGAGTTACGGGTTGGAGACCGCAACGCGTGTAAGAGCGCGTGCGAGGCGTTTCAGAGCCCTGAGTACTGCTGCAGCGGCGCGTATGCTTCACCCGCGACTTGTAAGCCTTCGGTTTATTCACAGATATTTAAATCCGCGTGTCCCAAATCGTACAGCTACGCCTACGACGACGCTACGAGTACGTTTACGTGTACGGGAGCTGATTATACCATCACATTCTGCCCTTCAAACACAAGGTAA 744 0.5363 MDFFAPHYFSIHIALIWVLLCRGASGATFILINKCDYTVWPGILANAGSSGLDSTGFELRPGGSRSFQVLPKWSGRIWGRTGCNFDPNTQQGSCTTGDCGSNQVQCNGGGASPPATLAEFTIGSGTQDFYDVSLVDGYNLPMMVDPSGGSGTCGSTGCVADLNQRCPNELRVGDRNACKSACEAFQSPEYCCSGAYASPATCKPSVYSQIFKSACPKSYSYAYDDATSTFTCTGADYTITFCPSNTR* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0639 247 CDD TLP-PA 28 242 - -
Apr9g0639 247 SUPERFAMILY Osmotin, thaumatin-like protein 27 244 IPR037176 -
Apr9g0639 247 PANTHER THAUMATIN-LIKE PROTEIN 1 17 245 - -
Apr9g0639 247 ProSiteProfiles Thaumatin family profile. 26 243 IPR001938 -
Apr9g0639 247 SMART tha2 29 243 IPR001938 -
Apr9g0639 247 PIRSF PR5 3 247 IPR001938 -
Apr9g0639 247 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Apr9g0639 247 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Apr9g0639 247 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Apr9g0639 247 PRINTS Pathogenesis-related protein signature 233 242 IPR001938 -
Apr9g0639 247 Pfam Thaumatin family 33 243 IPR001938 -
Apr9g0639 247 Gene3D Thaumatin 27 243 IPR037176 -
Apr9g0639 247 PANTHER OS03G0233200 PROTEIN 17 245 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0639 Apr-Chr9 10405950 10406810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0639 9 245 Receptor kinase-like Gene Family AT5G38280 47.368 7.22e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0639 - - gmx:100786772 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0639 9 10405950 10406810 Apr3g0355 3 7019584 7021217 ECH
Apr9g0639 9 10405950 10406810 Apr7g1106 7 18040894 18046645 ECH
Apr9g0639 9 10405950 10406810 Apr9g0639 9 10405950 10406810 ECH