Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0130 ATGGGGGTTGGAAATTTTAAGGGTTGCTTTGTTCTTATGCTCTTTGGTGCCCTTTTGGTGGGTTTAGTGGGTGGAATTGGTGTTAATTGGGGCACACAAGCAACACACCCTTTGCCACCATCCACTGTGGTGAAAATGCTGAAAGACAATGGTATTCAGCAAGTTAAGCTTTTTGATGCTGATCCTGATATTTTAGATGCTCTAAAAAAGTCTGGGATTCAGGTGATGGTGGGTATCCCAAATGACATGCTCTACACACTGGCTAACAGTGTGCAAGCAGCAGAAAAGTGGGTTTCCAAGAATGTTTCAGCACATGTCTCATCCGGTGGAGTAGACATCAGGTATGTGGCAGTGGGAAATGAACCTTTCTTGTCAACTTACAATGGTACTTTTGAAGCCACAACACTTCCAGCTCTTCAAAACATCCAATCAGCTCTTGTAAAAGCTGGTTTAGGCAATCGGGTTAAAGTCACAGTTCCCTTGAATGCTGATGTGTATCAGAGTGCACAAGTACCATCGGATGGCGACTTCAGGCAAAACATCCATGATGTCATGCTGCAGATTGTCAAGTTCTTGAGCCAGAATAATGCTCCATTTACAGTGAACATCTATCCTTTTATCAGCCTTTATGCAGATCCCAATTTTCCTGTTGACTATGCCTTTTTCAATGGCTTTCAGACTCCTATAAATGACAATGGAAAGATCTATGACAATGTCTTTGATGCTAACCATGATACTCTAGTATGGGCATTGCAGAAGAATGGTTTTGGAAACATGCCCATAATTGTAGGGGAAATTGGGTGGCCTACAGATGGAGACAGAAATGCAAATCTTCAATTTGCACAACGTTTCAACCAAGGCTTTATGTCACGCTACATTGCCGGAAAGGGGACTCCAATGAGGCCTGGTCCCATGGATGCTTACTTGTTTAGTTTCATAGATGAAGATAACAAAAGCATTCAGCCGGGTAATTTCGAACGTCATTGGGGGTTGTTTTACTATGATGGGCAACCAAAATACCAGCTTAACATTGGATCAAGGGCAAATGGTTTAGTGGGTGCTACTGGGATATCATATCTTCCCAAAAAGTGGTGTATTTTGAAGCCCTCAGCAAACCTCAATGATGATCAAGTGGCACCAAGTGTGTCTTATGCTTGTCAAAATGCAGATTGCACCAGTCTTGGTTATGGTACTTCATGTGGAAATTTAGATGCTCGCGGTAATATCTCTTATGCATTTAATAGCTACTTTCAGGTGAATGACCAGATGGATAGTGCTTGCAAATTCCCTGGCCTTTCTGTGGTCACTGACAAAGATCCTTCAAATGGAGATTGCAAATTCAAAATCATGATCCAGACAGATTGTGCTGGCCTTTATGGGAATGGGAGAATTGGGTCTCTTAGTATACTACTATTTATATTTTTGTTTTTCACTATTCTGTAA 1443 0.4165 MGVGNFKGCFVLMLFGALLVGLVGGIGVNWGTQATHPLPPSTVVKMLKDNGIQQVKLFDADPDILDALKKSGIQVMVGIPNDMLYTLANSVQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFEATTLPALQNIQSALVKAGLGNRVKVTVPLNADVYQSAQVPSDGDFRQNIHDVMLQIVKFLSQNNAPFTVNIYPFISLYADPNFPVDYAFFNGFQTPINDNGKIYDNVFDANHDTLVWALQKNGFGNMPIIVGEIGWPTDGDRNANLQFAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSFIDEDNKSIQPGNFERHWGLFYYDGQPKYQLNIGSRANGLVGATGISYLPKKWCILKPSANLNDDQVAPSVSYACQNADCTSLGYGTSCGNLDARGNISYAFNSYFQVNDQMDSACKFPGLSVVTDKDPSNGDCKFKIMIQTDCAGLYGNGRIGSLSILLFIFLFFTIL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0130 480 Pfam X8 domain 363 432 IPR012946 -
Apr9g0130 480 Gene3D Glycosidases 25 350 - -
Apr9g0130 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 5 14 457 - -
Apr9g0130 480 Gene3D - 360 462 - -
Apr9g0130 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 259 272 IPR000490 GO:0004553|GO:0005975
Apr9g0130 480 Pfam Glycosyl hydrolases family 17 26 343 IPR000490 GO:0004553|GO:0005975
Apr9g0130 480 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Apr9g0130 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 457 IPR044965 GO:0004553|GO:0005975
Apr9g0130 480 SMART X8_cls 363 447 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0130 Apr-Chr9 1539590 1543958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0130 6 479 Glycoside Hydrolase AT4G31140 69.008 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0130 K19893 - gmx:100790297 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0130 9 1539590 1543958 Apr1g0505 1 6231045 6232791 PCT
Apr5g1196 5 16407288 16411376 Apr9g0130 9 1539590 1543958 PCT