Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0023 ATGAACAGCATGCATATAGAAACCCCGGAAACACTTGCCGATGGTGGCAAAAACTTTGACGATGATGGACGAGTTAAAAGAACTGGGACATGGGTGACTGCAAGTGCTCATATTATAACCGCTGTGATTGGTTCTGGAGTTCTGTCTCTTGCATGGGCAATTGCGCAGATGGGTTGGGTGGCTGGCCCTGCAGTACTCTTTGCCTTCTCTTTTATCACCTATTTCACTTCCACTCTTCTCGCTGATTGTTACCGTTCACCTGACCCTGTCCATGGCAAGCGAAACTATACATATTCTGAGGTTGTCAAAGCTAACTTAGGAGGCAGGAAATTTCAGCTGTGTGGATTAGCTCAGTATATAAATCTTGTTGGTGTAACCATCGGCTACACAATAACTGCATCGATTAGTATGGTGGCGGTGAAAAGGTCGAACTGTTTCCACAAACATGGGCATCAAGACAAGTGTTATATATCAAACAACCCATCCATGATCATATTTGCCTGCATCCAAATCTTTCTAAGTCAAATACCAAACTTCCACAAGCTCTCTTGGCTCTCAATCGTTGCAGCCGTTATGTCTTTCGCTTATTCTTCCATTGGCCTTGGCCTCTCCCTAGCCAAAGTCTCAGGTGGGAGCCATGTACGAACATCCTTAACAGGGGTGCAAGTTGGGGTGGACGTATCAGGATCAGAGAAGGTTTGGAGGATGTTTCAAGCTATTGGTGACATTGCCTTTGCTTATGCTTTTTCTAATGTGCTCATTGAGATCCAGGATACCCTAAAGTCAAGCCCACCTGAGAACAAGACAATGAGGAGAGCAAGCTTGATTGGGATTCTGACTACAACATTGTTTTATGTACTATGTGGGTGCTTTGGTTATGCTGCATTTGGAAATGATGCACCAGGAAATTTTCTCACAGGATTCGGCTTCTACGAGCCCTTTTGGCTAATTGACTTTGCTAATGTCTGCATAGCAGTACATCTAATTGGGGCGTACCAGGTTTTTGTCCAACCAATATTTGGATTTGTGGAGAAATGGAGTAAAGAAAAATGGTCAGAAAGCCAATTTATAAATGGAGAGCATCCTTTGAACATTCCTCTGTGTGGAAGCTATAACGTAAACTTCTTCAGAATAGTGTGGAGAACTGCGTATGTGATTATCACAGCTGTTTTAGCTATGATATTTCCATTCTTCAATGACTTTTTGGGACTGATTGGTTCCTTATCCTTTTGGCCATTGACGGTGTATTTTCCCATCGAGATGTACATTAAGCGGTCCAAGATGCAAAAGTTTTCATTCACCTGGACTTGGCTCAAGATACTGAGTTGGGTTTGCCTAATCATTTCTATTATCTCAGCTGTGGGCTCCATTCAGGGCCTTGCTCAACATCTCAAAAAGTACAAGCCCTTCCAAACACAACAATGA 1425 0.4309 MNSMHIETPETLADGGKNFDDDGRVKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSEVVKANLGGRKFQLCGLAQYINLVGVTIGYTITASISMVAVKRSNCFHKHGHQDKCYISNNPSMIIFACIQIFLSQIPNFHKLSWLSIVAAVMSFAYSSIGLGLSLAKVSGGSHVRTSLTGVQVGVDVSGSEKVWRMFQAIGDIAFAYAFSNVLIEIQDTLKSSPPENKTMRRASLIGILTTTLFYVLCGCFGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFVQPIFGFVEKWSKEKWSESQFINGEHPLNIPLCGSYNVNFFRIVWRTAYVIITAVLAMIFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKRSKMQKFSFTWTWLKILSWVCLIISIISAVGSIQGLAQHLKKYKPFQTQQ* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0023 474 PANTHER OS05G0424000 PROTEIN-RELATED 6 467 - -
Apr9g0023 474 Gene3D Amino acid/polyamine transporter I 24 462 - -
Apr9g0023 474 Pfam Transmembrane amino acid transporter protein 27 460 IPR013057 -
Apr9g0023 474 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 6 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0023 Apr-Chr9 334631 338345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0023 2 471 Organic Solute Cotransporters AT5G49630 76.000 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0023 K24917 - gmx:100782534 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0023 9 334631 338345 Apr1g0412 1 5120108 5126746 PCT
Apr1g0411 1 5109877 5117465 Apr9g0023 9 334631 338345 PCT