Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0412 ATGGTTGAAAACGCTTCAAGAAGCAACCTTGGTTTCCACCAAGATTTTGGCATGGAGGAGCACCGCATTGATGCCGTTCTTCCAAAACTTGATTCCAAGTCATACGACGATGATGGCCATGTTAAGCGAACAGGAAACATCTGGACAACAAGCTCGCACATAATAACTGCAGTAGTGGGTTCTGGGGTGCTATCCCTAGCATGGGCCATGGCCCAAATGGGTTGGATTGCTGGGCCTTTGACGATGGTGTTCTTCAGTTTGATAACTTTGTATACATCAGCTCTTCTTGCTGATTGCTATCGCTCTGGAGACCCCATTTCTGGGAAGAGAAACTACACTTTCATGGAAGCAGTTCAAAACATTCTCGGTGGATACTATTCTACGTTTTGTGGGTTATTTCAGTACTCAAATCTTTATGGCACTGCCATAGGATACACAATTGGGGCCGCCATAAGCATGATGGCGATAAAGAGGTCAAATTGTTTCCATTCCTCAGGCGGGAAAAACCCGTGTCACGTGCCAAGCAACCCATATATCATCAGCTTTGGCATAATACAAATTTTATTTTCTCAAATTCCAGATTTTCATAAAACATGGTGGCTCTCAATACTTGCAGCAATCATGTCTTTCACTTACTCAATAATTGGCCTCGCTCTCGGAATTGCCAAAGTTGCAGAAACGGGTTCTTTCAAAGGTACTCTCACAGGTGTAAGCATTGGAACTGTGACAGAAACCCAAAAAGTATGGGGGGTTTTCCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCTCAAATTCTCATTGAAATTCAGGACACCATAAAATCTCCACCATCTGAATCAGAGACGATGAAGAAGGCTGCAAAGGTAAGCATTGGAGTGACCACAACGTTTTATATGCTTTGTGGCTTCATGGGCTATGCTGCTTTTGGAGACGCAGCACCTGGGAACCTGCTTACTGGATTTGGTTTTTATAACCCATATTGGCTTATAGACATTGCTAATGCTGCTATCGTAATTCACCTTGTGGGAGCATACCAAGTCTATGCCCAGCCCCTCTTTGCCTACGTTGAACAAAAGGCCGCAAAAAGATGGCCCATAGTTGAGATGGAACACAAAATTCAGATTCCTGGTTTTGGTTCTTACAATCTAAACCCATTTAGATTGGTTTGGAGAACATTGTTCGTTATCAAAACCACTGTTATAGCAATGTTGATTCCATTCTTCAATGACGTATTGGGATTACTTGGAGCACTGGGGTTTTGGCCTTTAACTGTTTTTTTCCCGGTGCAGATGAGTATCTCACAGAAGAGGATCCCAAAGTGGAGTACGACGTGGATTTGTATGCAAATTCTTAGTGTTGTCTGCTTCATAGTATCACTTGTGTCTGCTGTAGGCTCAGTCGCTAGTATCGTGATTGACCTACAAAAATACAAACCGTTCAGCGTAGATTATTAA 1461 0.4285 MVENASRSNLGFHQDFGMEEHRIDAVLPKLDSKSYDDDGHVKRTGNIWTTSSHIITAVVGSGVLSLAWAMAQMGWIAGPLTMVFFSLITLYTSALLADCYRSGDPISGKRNYTFMEAVQNILGGYYSTFCGLFQYSNLYGTAIGYTIGAAISMMAIKRSNCFHSSGGKNPCHVPSNPYIISFGIIQILFSQIPDFHKTWWLSILAAIMSFTYSIIGLALGIAKVAETGSFKGTLTGVSIGTVTETQKVWGVFQALGNIAFAYSYSQILIEIQDTIKSPPSESETMKKAAKVSIGVTTTFYMLCGFMGYAAFGDAAPGNLLTGFGFYNPYWLIDIANAAIVIHLVGAYQVYAQPLFAYVEQKAAKRWPIVEMEHKIQIPGFGSYNLNPFRLVWRTLFVIKTTVIAMLIPFFNDVLGLLGALGFWPLTVFFPVQMSISQKRIPKWSTTWICMQILSVVCFIVSLVSAVGSVASIVIDLQKYKPFSVDY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0412 486 Pfam Transmembrane amino acid transporter protein 44 473 IPR013057 -
Apr1g0412 486 PANTHER OS05G0424000 PROTEIN-RELATED 16 480 - -
Apr1g0412 486 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 16 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0412 Apr-Chr1 5120108 5126746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0412 14 486 Organic Solute Cotransporters AT5G09220 67.086 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0412 K24917 - gmx:100813602 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0412 1 5120108 5126746 Apr1g0412 1 5120108 5126746 ECH
Apr9g0023 9 334631 338345 Apr1g0412 1 5120108 5126746 PCT