Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g2156 ATGTCAATGAATAAAGTAGTGCTAAAGGTGGAATTATATGATGAGAAAATTAAGAAAAAGGCCATGAAGGCAATCTCATGTCTTCGAGGGGTTGAATCAGTCTCTGTGGATATGGAGGAGCAGAAATTGACCTTAATTGGAAACATCGACCCTGTGAATGCAGTGGGGAAGATGAGGAAGCTGTGTTACACTGAAATACTCTCTGTTGGACCAGCCAAAGAGGAGAAGAAGGAACCTGAGAAAGAACAGATCAAGAAAAACGATCAAAATGAGAACTCTGGTGACATTGTGAAGCTCTGTGAAGCCTATTATCGTAATCAGATGAGACAACCACCTTATTATTATTGCACATGTGTGGAAGAGAATCCTAATGGCTGTGTCATCTGCTAA 390 0.4051 MSMNKVVLKVELYDEKIKKKAMKAISCLRGVESVSVDMEEQKLTLIGNIDPVNAVGKMRKLCYTEILSVGPAKEEKKEPEKEQIKKNDQNENSGDIVKLCEAYYRNQMRQPPYYYCTCVEENPNGCVIC* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g2156 129 SUPERFAMILY HMA, heavy metal-associated domain 3 64 IPR036163 GO:0046872
Apr8g2156 129 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 129 - -
Apr8g2156 129 Pfam Heavy-metal-associated domain 9 59 IPR006121 GO:0046872
Apr8g2156 129 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 3 129 - -
Apr8g2156 129 MobiDBLite consensus disorder prediction 71 90 - -
Apr8g2156 129 Gene3D - 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g2156 Apr-Chr8 32140736 32141648 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g2156 - - gmx:100793345 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0645 6 9425521 9426584 Apr8g2156 8 32140736 32141648 PCT
Apr8g2156 8 32140736 32141648 Apr6g0644 6 9418733 9420056 PCT