Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0645 ATGAAGAAAGTAGTGTTGAAGGTGGAGTTACATGATGGTAGAATCAAGCAAAAAGCTATGAAGACAGCATCTGGCCTTTCAGGGGTTAAATCAGTTTCGATAGACATGAAAGACAAGCAATTGATCTTATCCGGGGACATTGACCCAGTAAATGCAGTGTCCAAGCTACGAAAGTGGTGTCACACTGAAATAGTTTCAGTTGGACCAGCAAAAGAGGAGGACTCGCCAAAAGTAACTGTTCCTTCCCAGCCCTATGAAGTTTATCCCTTTATTTATCAGATGACACCGCCACAATATAGTCAAAGTTACTATGTTAGAAGTGTCGAAGAGGATCCTAGTGGCTGTGTCATATGCTAA 357 0.4174 MKKVVLKVELHDGRIKQKAMKTASGLSGVKSVSIDMKDKQLILSGDIDPVNAVSKLRKWCHTEIVSVGPAKEEDSPKVTVPSQPYEVYPFIYQMTPPQYSQSYYVRSVEEDPSGCVIC* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0645 118 Pfam Heavy-metal-associated domain 6 58 IPR006121 GO:0046872
Apr6g0645 118 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 118 - -
Apr6g0645 118 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 118 - -
Apr6g0645 118 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Apr6g0645 118 Gene3D - 1 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0645 Apr-Chr6 9425521 9426584 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0645 - - gmx:100306254 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0645 6 9425521 9426584 Apr6g0645 6 9425521 9426584 ECH
Apr6g0645 6 9425521 9426584 Apr8g2156 8 32140736 32141648 PCT