Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0644 ATGAAGAAAGTGGTGCTAAAGGTGGAACTCTATGATGACAAGATCAAGAAAAAGGCCATGAAGGCAGTATCTGGTCTTTCTGGGGTTGAGTCAGTCTCTGTGGATATGAAGGACCAGAAAATGACCATAATTGGGGATGTTGATCCTGTTGTTGTAGTGGGCAAACTTAGAAAATTTTGTCATGCTGAAATTCTTTCAGTTGGACCAGCCAAAGAGGAAAAAAAGGAAGAAGCTAAGAAAGAGGACAAGAAAGATGAGAAGAAAGATCCAAAGGTGGAATATGCTGAACTTTTGAAGGTCTATGAAGCGTATTATAATCAAACTAGACAGCCATATCCATATTATTATTACAAAACTGTAGAAGACTATCCTAGTGGCTGTGTTATTTGCTAA 393 0.3817 MKKVVLKVELYDDKIKKKAMKAVSGLSGVESVSVDMKDQKMTIIGDVDPVVVVGKLRKFCHAEILSVGPAKEEKKEEAKKEDKKDEKKDPKVEYAELLKVYEAYYNQTRQPYPYYYYKTVEDYPSGCVIC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0644 130 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Apr6g0644 130 Gene3D - 1 73 - -
Apr6g0644 130 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 1 130 - -
Apr6g0644 130 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Apr6g0644 130 MobiDBLite consensus disorder prediction 69 89 - -
Apr6g0644 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0644 Apr-Chr6 9418733 9420056 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0644 - - gmx:100306444 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0644 6 9418733 9420056 Apr6g0644 6 9418733 9420056 ECH
Apr8g2156 8 32140736 32141648 Apr6g0644 6 9418733 9420056 PCT