Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0582 ATGGAAGCGTTTCAAGGGGCAAGGGATGATGTTACCTTCCAAATGGGGTTGATTTGGGGCCAAATCAAAGAGCCACTGATCGTGCCAATGCTGAGAGTGGCAGTGTTTCTGTGCTTGCTCATGTCGATGATGATGTTGTTGGAGAGAGTGTACATGGGCATTGTCATTTGCTTGGTGAAGCTTTTTGGTCGAAAACCCGAAAAGCGTTACAAATGGGAGCCTATGAGGGATGACGTTGAATTGGGAAACTCTTCTTACCCAATGGTTTTGGTCCAAGTCCCAATGTACAATGAAAGAGAGGTTTATCAGCTATCAATTGGTGCTGCATGTGGGCTTTCTTGGCCTTCAGATAGGATCATCATACAAGTTCTTGATGATTCTACTGACCCAACAATCAAGGAGTTGGTGCAAATGGAATGCAGTAGATGGGCAGGCAAAGGGGTGAACATAAAGTATGAGGTAAGGGACAACAGAAACGGGTACAAAGCAGGAGCACTAAAAGAGGGTATGAAGCGAAGCTACGTGAAGCAATGTGATTATGTAGCCATTTTTGACGCGGATTTTCAACCAGAACCTGATTTCCTCTGGCGCACCGTCCCATTCCTTGTCAACAACCCTGAACTTGGTCTCGTTCAGGCACGCTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACAAGGATGCAAGAGATGTCACTGGATTACCATTTCACTGTGGAACAAGAAGTGGGGTCTTCCACTTATGCTTTCTTTGGCTTCAACGGAACTGCGGGTGTATGGAGAATTTCGGCTCTGAATGAGGCTGGGGGGTGGAAGGATAGGACCACAGTGGAAGATATGGACTTGGCTGTCCGAGCCAGTCTCAAAGGATGGAAATTCTTGTACCTAGCCAATTTGAAGGTTAAAAATGAATTGCCAAGCACTTTAAAGGCCTACCGCTACCAACAGCATCGTTGGTCTTGTGGGCCAGCCAATCTTTTCAAGAAAATGGCCATGGAGATTATTAGAAACAAGAAAGTGTCCTTGTGGAAGAAGATTCATGTGATCTACAGCTTCTTCTTTGTCAGGAAGGTTGTGGCCCACGTCAACACTTTTATGTTCTATTGCATTGTGTTACCAGCAACAGTTGTGGTGCCTGAGGTTGTGGTCCCCAAGTGGGGTGCTGTGTATATCCCTTCCATCATCACACTCCTAAATGCTGTTGGAACTCCGAGGTCACTTCATTTATTGGTCTTCTGGATTCTCTTTGAGAATACCATGTCTCTGCATCGAACAAAGGCAACAATTATTGGTCTATTAGAGGCAAATCGAGTGAATGAATGGATTGTCACTGAAAAGCTTGGAGAAGCTCTCAAGGGTAAAGGTGGAGGCAAAGCACCCAAGAAGAATCGTTTCAAGATTGGAGACAGGATCCATATATTGGAACTTCTTGTTGGATTCTACCTCTTCTTCTGTGGCTGCTATGATTTTATGTTTGGGAAGAATCGCTTCTACATATTCCTATTTATCCAATCGTTTGCTTTCTTTATCATGGCATTTGGATATGTTGGCACTTTCGTTCCCCACTCCTAG 1572 0.4459 MEAFQGARDDVTFQMGLIWGQIKEPLIVPMLRVAVFLCLLMSMMMLLERVYMGIVICLVKLFGRKPEKRYKWEPMRDDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQMECSRWAGKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTVPFLVNNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTLKAYRYQQHRWSCGPANLFKKMAMEIIRNKKVSLWKKIHVIYSFFFVRKVVAHVNTFMFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEANRVNEWIVTEKLGEALKGKGGGKAPKKNRFKIGDRIHILELLVGFYLFFCGCYDFMFGKNRFYIFLFIQSFAFFIMAFGYVGTFVPHS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0582 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 363 IPR029044 -
Apr8g0582 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 302 IPR029044 -
Apr8g0582 523 Pfam Glycosyltransferase like family 2 88 322 - -
Apr8g0582 523 PANTHER - 1 522 - -
Apr8g0582 523 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 522 - -
Apr8g0582 523 CDD CESA_CaSu_A2 87 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0582 Apr-Chr8 5228561 5234079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr8g0582 2 522 Miscellaneous Gene Families AT5G03760 79.310 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0582 K13680 - gmx:100810016 954.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0582 8 5228561 5234079 Apr8g1885 8 29340045 29344004 ECH
Apr8g0582 8 5228561 5234079 Apr8g0582 8 5228561 5234079 ECH
Apr4g0280 4 2337578 2343193 Apr8g0582 8 5228561 5234079 PCT