Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1107 ATGGGTCTCTTATCACATCACCGACATTCTTCTCAACCGTTCTTGTGCTTCGTACTCTTCCTCGTTTTCAAAGGGGTTTCAGGGGCAACATTTACTTTCGTGAACAAGTGCGATTACACGGTATGGCCCGGAATTTTAGGAAAACCCGACCTCGGAAGCTCCGGCTTTGAACTCGCCAAGGGAGGTTCCAGAAGTTTCCAGGCTCCGACCGGTTGGTCCGGTAGATTCTGGGGAAGAACCGGTTGCCAATTCGACGGTTCTGGACGCGGAACATGCGCCACCGCGGACTGCGGCTCCGGCGAGATCAACTGCAACGGCGCCGGAGCCTCGCCGCCGGCCACGCTCGCCGAGTTCACTCTCGGCACGGGTTCCATGGACTACTACGATGTGAGCCTCGTCGACGGCTACAATTTACCAATGATGGTGGTCGCCAGCGGCGGTTCGGGCTCGTGCGCCGCCACGGGCTGCGGCGCGGATCTCAACCGGCGGTGTCCGTCGGAACTGAGGGTGGACGGCGGCGACGCCTGTCAGAGTGCTTGCGGCGCGTTTGGGAAACCCGAGTATTGCTGCAACGGTGCGTTTAGCAACCCTTCCACGTGCAAGCCTTCTATGTATTCACAAATATTCAAATCCGCATGTCCCAAATCGTATAGCTACGCTTACGATGATGCCACTAGCACGTTCACTTGTTCTGGTGCTGACTATACGATTACATTTTGTCCTTCTTCTCCTAGTTTGAAGTCTTCAACGGATTCGACTCCAAAGTTAACGAATCCGGGTACGGGTACAGGGACTGGGTCGGGTTCACCGGTTGAGCAATCTGAATTAGCTTCTACTTCGTGGTTAGCGGATATGGCTACGGCAACGGGGGCATCAACACGAACAAGGGCTTTTTTGAGTTCAAAGGGTTCTATTTTGGTGGCTGTTACTTTCATTGTGTGTCTTTTGGTGGCTTAG 957 0.5434 MGLLSHHRHSSQPFLCFVLFLVFKGVSGATFTFVNKCDYTVWPGILGKPDLGSSGFELAKGGSRSFQAPTGWSGRFWGRTGCQFDGSGRGTCATADCGSGEINCNGAGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMMVVASGGSGSCAATGCGADLNRRCPSELRVDGGDACQSACGAFGKPEYCCNGAFSNPSTCKPSMYSQIFKSACPKSYSYAYDDATSTFTCSGADYTITFCPSSPSLKSSTDSTPKLTNPGTGTGTGSGSPVEQSELASTSWLADMATATGASTRTRAFLSSKGSILVAVTFIVCLLVA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1107 318 Gene3D Thaumatin 29 241 IPR037176 -
Apr7g1107 318 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Apr7g1107 318 CDD TLP-PA 30 240 - -
Apr7g1107 318 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Apr7g1107 318 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Apr7g1107 318 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Apr7g1107 318 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Apr7g1107 318 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Apr7g1107 318 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Apr7g1107 318 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Apr7g1107 318 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 7 266 - -
Apr7g1107 318 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Apr7g1107 318 MobiDBLite consensus disorder prediction 244 272 - -
Apr7g1107 318 Pfam Thaumatin family 35 241 IPR001938 -
Apr7g1107 318 PANTHER OS03G0233200 PROTEIN 7 266 IPR001938 -
Apr7g1107 318 SMART tha2 31 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1107 Apr-Chr7 18058874 18060677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1107 14 261 Receptor kinase-like Gene Family AT5G38280 48.659 4.42e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1107 - - gmx:100802906 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1107 7 18058874 18060677 Apr7g1107 7 18058874 18060677 ECH
Apr3g0356 3 7036183 7037662 Apr7g1107 7 18058874 18060677 ECH
Apr5g1840 5 21570601 21574538 Apr7g1107 7 18058874 18060677 ECH