Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0717 ATGACAGAAGAACAACAGAAAACTACTGCAGAGTCAGAAACTGCTTCAGTTCCTCCACCTGCTCCAGCTGAGACTCAACCTCCTCCACCTGCACCTGAACCTGTTCCTGAGCCTCCAAAGGATGTGGCTGAGGAGAAATCAGTGATTCCAGTGCCTTCTTTGGATGATAAGCCTGATGATTCCAAGGCTCTTGTGTTGGTTGAGAAGACAGAAGAAGTTGCTGAAGTGAAACCATCTGAGGGCTCTGTCAACCGAGATGCTGTGCTTGCAAGAGTTGCAACAGAGAAGAGGTTGTCCCTAATCAAAGCATGGGAAGAAAGTGAAAAATCAAAAGCTGAAAACAAAGCTCACAAAAAGCTTTCAGCCATTTCATCATGGGAGAACAGTAAGAAAGCTGCTGTGGAGGCTGAATTGAAAAAGATTGAAGAACAACTGGAGAAGAAAAAGGCAGAATATGCAGAGAAAATAAAAAACAAAATAGCAACAATCCACAGGGAAGCTGAAGAAAAGAGAGCAATTATTGACGCAAAAAAAGGAGAAGATCTTCTCAAGGCTGAGGAAACAGCTGCAAAGTATAGAGCAACAGGAACTGCTCCAAAGAAACTCCTTGGCTGTTTCTAA 621 0.4332 MTEEQQKTTAESETASVPPPAPAETQPPPPAPEPVPEPPKDVAEEKSVIPVPSLDDKPDDSKALVLVEKTEEVAEVKPSEGSVNRDAVLARVATEKRLSLIKAWEESEKSKAENKAHKKLSAISSWENSKKAAVEAELKKIEEQLEKKKAEYAEKIKNKIATIHREAEEKRAIIDAKKGEDLLKAEETAAKYRATGTAPKKLLGCF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0717 206 MobiDBLite consensus disorder prediction 1 62 - -
Apr6g0717 206 Pfam Remorin, N-terminal region 40 92 IPR005518 -
Apr6g0717 206 Pfam Remorin, C-terminal region 96 201 IPR005516 -
Apr6g0717 206 MobiDBLite consensus disorder prediction 20 37 - -
Apr6g0717 206 MobiDBLite consensus disorder prediction 38 62 - -
Apr6g0717 206 PANTHER OS02G0117200 PROTEIN 1 206 - -
Apr6g0717 206 PANTHER REMORIN 1.4 1 206 - -
Apr6g0717 206 Coils Coil 131 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0717 Apr-Chr6 11164925 11168177 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0717 - - gmx:100499700 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2216 4 31183671 31187984 Apr6g0717 6 11164925 11168177 ECH
Apr7g0604 7 12629879 12632499 Apr6g0717 6 11164925 11168177 ECH
Apr2g1179 2 18016110 18017978 Apr6g0717 6 11164925 11168177 ECH
Apr6g0717 6 11164925 11168177 Apr6g0717 6 11164925 11168177 ECH