Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2216 ATGGCAGAACTCCAAACCAAGGCAGAAACTGCCTCAGCTACGGCTACGGTTGCGGCAAAGCCACCACCGAACGACACCGTTGCTAACAAAGTTTCTCAAACAACAGCACCAGAGGAATCCAAAGCTGTTATCGTTGCTGCAGCTGAGAAGACTCCAGTTCCTGCAAACAAACAAAACTCGAGAGGATCCCTTGATAGGGATATTGCTTTGGCTGAGGTAGAGAAAGAGAAAAAGTTGTCTTATGTGAAGGCATGGGAAGAAAGTGAAAAAGCCAAAGCAGACAACAAAGCTCAAAAGCATCTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAGAAGGCAGCTCTTGAAGCTGAGCTGAAAAAAATTGAGGAACAATTGGAGAAAAAGAAAGCAGAATATGGGGAAAGAATGAAGAACAAAATAGCCTCGATTCACAAGGAAGCAGAGGAGCAGAGGGCAATGGTTGAAGCCAAACGTGGTGAAGAGGTTCTCAAGGTAGAGGAAACGGCTGCAAGATATCGTGCAACAGGAACCACTCCAAAGAAGACCATAGGATGCTTTTGA 564 0.4574 MAELQTKAETASATATVAAKPPPNDTVANKVSQTTAPEESKAVIVAAAEKTPVPANKQNSRGSLDRDIALAEVEKEKKLSYVKAWEESEKAKADNKAQKHLSAVAAWENSKKAALEAELKKIEEQLEKKKAEYGERMKNKIASIHKEAEEQRAMVEAKRGEEVLKVEETAARYRATGTTPKKTIGCF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2216 187 Coils Coil 105 139 - -
Apr4g2216 187 PANTHER CARBOXY-TERMINAL REGION REMORIN 1 187 - -
Apr4g2216 187 MobiDBLite consensus disorder prediction 1 38 - -
Apr4g2216 187 Pfam Remorin, N-terminal region 21 73 IPR005518 -
Apr4g2216 187 PANTHER OS02G0117200 PROTEIN 1 187 - -
Apr4g2216 187 Pfam Remorin, C-terminal region 77 182 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2216 Apr-Chr4 31183671 31187984 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2216 - - aprc:113863237 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2216 4 31183671 31187984 Apr6g0717 6 11164925 11168177 ECH
Apr4g2216 4 31183671 31187984 Apr4g2216 4 31183671 31187984 ECH
Apr7g0604 7 12629879 12632499 Apr4g2216 4 31183671 31187984 ECH
Apr2g1179 2 18016110 18017978 Apr4g2216 4 31183671 31187984 ECH
Apr4g2216 4 31183671 31187984 Apr10g1352 10 25836492 25842211 PCT