Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1179 ATGGTACCCGAGAACGCAGACACTTCAAGCAGTTTTAGACGAGTGCGCAGCGACAACTCTGCTCCTAAAACCCCCGACACTTTGTCACCTAATGAATCGTCATGTGTTTCCTCTTTGCATGTTGCAGTTCCTGCTGCTAAAATGGACACAAAGGATTCAGCTGACAGAGATGCTGCGCTTGCGAGGGTTGAATTAGACAAAAGACTGGCTCTAATTAAAGCATGGGAAGAAAGTGAGAAGACAAAAGCAGAGAACAAGGCATATAAGAGGCATTCTGCAGTTGGGTTGTGGGAGAATAGTAAGAAAGCATCAGCGGAGGCAAATCTCAAAAGAATTGAGGAAAAATTGGAAAGAAACAAGGCCGAGTGTGTTGAAAAAATGCAAAATAAAGTTGCTGAAATTCATCGATCCTCAGAAGAGAAAAGGGCATTGATTGAAGCCCAAAAAGGAGAAGATTTTCTCAAGATAGAGGAGAAAGCTGCAAAGTTTCGTACCCGTGGGTATCCCCCAAGGAAATGTCTTCCATGCTTCGGTAGTTAA 540 0.4352 MVPENADTSSSFRRVRSDNSAPKTPDTLSPNESSCVSSLHVAVPAAKMDTKDSADRDAALARVELDKRLALIKAWEESEKTKAENKAYKRHSAVGLWENSKKASAEANLKRIEEKLERNKAECVEKMQNKVAEIHRSSEEKRALIEAQKGEDFLKIEEKAAKFRTRGYPPRKCLPCFGS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1179 179 Pfam Remorin, C-terminal region 67 171 IPR005516 -
Apr2g1179 179 MobiDBLite consensus disorder prediction 1 35 - -
Apr2g1179 179 PANTHER OS02G0117200 PROTEIN 35 179 - -
Apr2g1179 179 PANTHER CARBOXY-TERMINAL REGION REMORIN 35 179 - -
Apr2g1179 179 Coils Coil 102 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1179 Apr-Chr2 18016110 18017978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1179 - - vra:106767655 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1179 2 18016110 18017978 Apr2g1179 2 18016110 18017978 ECH
Apr2g1179 2 18016110 18017978 Apr6g0717 6 11164925 11168177 ECH
Apr2g1179 2 18016110 18017978 Apr4g2216 4 31183671 31187984 ECH