Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1081 ATGGACAAGACTGGGTTGAAACAGCAGGCTCTCTTCATGCGAACTTCACTCCTTCATGAGGGCTACCTTGACGAGCAATTCATTCAGCTAGAGGAATTGGAAGACGACGTTAATCCCAATTTTGTGGAAGAAATTGTGACCCTTTTCTACAGCGACTCTGTAAGGCTGATCTACAACATAGAACGCGCACTGATCACTAATCCACCCAATTTCACCAAGCTAGACGATTACATGCATCAATTCAAGGGTAGTTGCTCAAGCATTGGAGCAAAGAAGGTGATGAATGAATGTACTAGATTCAGTGAATATTGTGCAGCAGAAAACTTCGAGGGATGCTTCAGGACTTTCCAACAAATCAATCTAGAGTATACGACTTTGAAGAGGAAGCTCGAAACTTACCTTCAGGTATCACTTTTAGTGTCATTTTCAGTTAGCAAAGGAAAGCAGCTCAAATTAGATGGTAATCACATTGGGTGTTGGTATCCTATTAGAAAGGTCGTTCAAGCACACCAGAATACTGGACCAATTAGATCGAGCACAGTGATGTACTATACAATAAAAGAATAA 567 0.4109 MDKTGLKQQALFMRTSLLHEGYLDEQFIQLEELEDDVNPNFVEEIVTLFYSDSVRLIYNIERALITNPPNFTKLDDYMHQFKGSCSSIGAKKVMNECTRFSEYCAAENFEGCFRTFQQINLEYTTLKRKLETYLQVSLLVSFSVSKGKQLKLDGNHIGCWYPIRKVVQAHQNTGPIRSSTVMYYTIKE* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1081 188 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Apr5g1081 188 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 15 135 IPR036641 GO:0000160
Apr5g1081 188 Pfam Hpt domain 44 123 IPR008207 GO:0000160
Apr5g1081 188 PANTHER - 4 137 IPR045871 GO:0000160|GO:0009927|GO:0043424
Apr5g1081 188 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 2-LIKE 4 137 - -
Apr5g1081 188 Gene3D HPT domain 2 141 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1081 Apr-Chr5 15463260 15465859 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1081 K14490 - gmx:100780856 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1081 5 15463260 15465859 Apr5g1081 5 15463260 15465859 ECH
Apr2g2473 2 29152847 29154218 Apr5g1081 5 15463260 15465859 ECH
Apr10g0937 10 21919220 21920742 Apr5g1081 5 15463260 15465859 ECH