Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0937 ATGGATAGAAACCAATCCCGGAGGCAAGTTGCTGCAATGAAACAATCCCTCTTTGACCAGGGATTACTGGATGAACAGTTTATCCAGCTGGAAGAATTGCAGGATGATGCTAATCCTAACTTTGTTGAGGAAATTGTGACTCTTTACTACCGTGATTCATCACGGCTTATCTCAAACATAGAACAGGCTCTCAAGGAGAGGAACCCTTTGGATTTCAACAAACTGGACACACTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTTAGGGAATATTGCAGGACAGGAAATGCAGAAGGATGCATGAAGAGCTTCCAACAATTGAAGAAAGAATATGCTTCACTGAGAAAGAAACTTGAAGCTTATTTTCAGTTGGTGAGGCAAGCTGGGCCGCAAGAAACAGCGTGTCGCTCCAAATAG 456 0.4342 MDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNIEQALKERNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRTGNAEGCMKSFQQLKKEYASLRKKLEAYFQLVRQAGPQETACRSK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0937 151 CDD HPT 42 106 IPR008207 GO:0000160
Apr10g0937 151 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 147 - -
Apr10g0937 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Apr10g0937 151 Gene3D HPT domain 1 147 IPR036641 GO:0000160
Apr10g0937 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Apr10g0937 151 PANTHER - 3 147 IPR045871 GO:0000160|GO:0009927|GO:0043424
Apr10g0937 151 Pfam Hpt domain 44 128 IPR008207 GO:0000160
Apr10g0937 151 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0937 Apr-Chr10 21919220 21920742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0937 K14490 - gmx:100526849 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2473 2 29152847 29154218 Apr10g0937 10 21919220 21920742 ECH
Apr10g0937 10 21919220 21920742 Apr10g0937 10 21919220 21920742 ECH
Apr10g0937 10 21919220 21920742 Apr5g1081 5 15463260 15465859 ECH