Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2473 ATGGACACAAACCAGTCACGCAAGGTTAATGCTATGAAACAGTCCCTCTTTGATAAGGGATTTCTGAATGATCAGTTTAGCCAACTGGAACAACTACAGGATGACGCTAATCCTGATTTTGTTGAGAAAATAGTGACCCTTTACTTCCGCGAATCACTTGGGAATATCTCGAACTTGGAGCAGATACTGAAGGAGAATCCACTTGATTTCAACAAGATGGAAAGAATTATGTACGGGCTTAATGGAAGCAGCTCAAGCATTGGAGCCAAAAAGGTGACAGCAGAAATCGTTGTGTTTAGGGAATATTGCAGGGCAGGAAATGCAAAAGGATGCAAGATGAGCTTCCAACAACTGAAGAAAGAACATGAAACACTGAAAAAGAAACTTGAAGCTTATTTTCAGTTGGCTAGACGACAAGCTGGGCCCCTTGAGACATCATCTCGACCCAAGTAA 453 0.4194 MDTNQSRKVNAMKQSLFDKGFLNDQFSQLEQLQDDANPDFVEKIVTLYFRESLGNISNLEQILKENPLDFNKMERIMYGLNGSSSSIGAKKVTAEIVVFREYCRAGNAKGCKMSFQQLKKEHETLKKKLEAYFQLARRQAGPLETSSRPK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2473 150 Gene3D HPT domain 3 143 IPR036641 GO:0000160
Apr2g2473 150 PANTHER - 4 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Apr2g2473 150 Coils Coil 115 135 - -
Apr2g2473 150 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 4 144 - -
Apr2g2473 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 136 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2473 Apr-Chr2 29152847 29154218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2473 K14490 - gmx:100526849 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2473 2 29152847 29154218 Apr10g0937 10 21919220 21920742 ECH
Apr2g2473 2 29152847 29154218 Apr2g2473 2 29152847 29154218 ECH
Apr2g2473 2 29152847 29154218 Apr5g1081 5 15463260 15465859 ECH
Apr2g2473 2 29152847 29154218 Apr2g2473 2 29152847 29154218 PCT