Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g2105 ATGGCAACAATCAACATAGAGCATGTTCAAAAGGTGGAACTGCAAAACAAGGCAATAGTTGAAATGCTTTACAAGGCACTATTGGGACAAGGAACAATGGACAAGGTGGCCAAATTGCTAGCAAGTGACCTTGAGTGGTGGTTCCATGGCCCCCCTCAATGCCAACACATGATGAGGGTGCTCACAGGAGAAACTGATCACACCAAGGCATTCCGGTTCGAGCCGAGAAGCATCACTGCCATCGGCGATTGCGTGATCGCCGAAGGGTGGGAAGGCCAGGCCTATTGGGTGCATGTGTGGACCCTTAAAAATGGCCTAATCACACAGTTTAGGGAGTACTTCAACACATGGCTTGTGGTGAGAGATTTGAGGCCACCGGGGTGGGAAGATAAGGAAGATAGCATGACATTGTGGCAAAGCCAGCCTCGTGATCTCTATCGCCGATCACTGCCAGGACTTGTGTTAGCCATTTAG 474 0.5 MATINIEHVQKVELQNKAIVEMLYKALLGQGTMDKVAKLLASDLEWWFHGPPQCQHMMRVLTGETDHTKAFRFEPRSITAIGDCVIAEGWEGQAYWVHVWTLKNGLITQFREYFNTWLVVRDLRPPGWEDKEDSMTLWQSQPRDLYRRSLPGLVLAI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g2105 157 PANTHER OS07G0691300 PROTEIN 12 157 IPR009798 -
Apr4g2105 157 Gene3D - 5 125 - -
Apr4g2105 157 PANTHER OS05G0342100 PROTEIN 12 157 - -
Apr4g2105 157 Pfam Wound-induced protein WI12 58 157 IPR009798 -
Apr4g2105 157 SUPERFAMILY NTF2-like 15 125 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g2105 Apr-Chr4 29951173 29951646 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g2105 - - gmx:100779835 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2105 4 29951173 29951646 Apr10g2160 10 34138836 34139427 ECH
Apr4g2105 4 29951173 29951646 Apr4g2105 4 29951173 29951646 ECH
Apr4g2105 4 29951173 29951646 Apr10g0818 10 20294505 20298405 ECH