Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0818 ATGGAGGAAATGAAAAACAAGGCAACGGTGGAAGCACTCTACAAGGCACTGTTGGGACAGGGCCAAATGGAAATGGTGACAAACATGTTAGCAAGTGACCTTGAGTGGTGGTTCCATGGCCCCCCACAGTGCCACCACATGATGAGGGTGCTCACCGGAGAAATTGAACACAACAAGGGGTTCCGATTCGAGCCGAGGAGCGTCACCGCCATCGGAGAGTGTGTGATCACCGAGGGATGGGAAGGCCAGGCTTATTGGGTCCATGTTTGGACAGTGAAAAATGGTCTCATCACACAATTTAGAGAGTACTTCAACACATGGCTTGTGGTGAGAGATTTGAGGCCACCAGGGTGGCAAAGCAAACATGACAACATCACATTGTGGCAAAGCCAGCCTCGTGATCTCTATAGCCGCTCACTTCCTGGATTGGTATTAGCAATTTAG 444 0.5023 MEEMKNKATVEALYKALLGQGQMEMVTNMLASDLEWWFHGPPQCHHMMRVLTGEIEHNKGFRFEPRSVTAIGECVITEGWEGQAYWVHVWTVKNGLITQFREYFNTWLVVRDLRPPGWQSKHDNITLWQSQPRDLYSRSLPGLVLAI* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0818 147 Pfam Wound-induced protein WI12 48 147 IPR009798 -
Apr10g0818 147 PANTHER OS05G0342100 PROTEIN 2 147 - -
Apr10g0818 147 PANTHER OS07G0691300 PROTEIN 2 147 IPR009798 -
Apr10g0818 147 Gene3D - 1 115 - -
Apr10g0818 147 SUPERFAMILY NTF2-like 1 113 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0818 Apr-Chr10 20294505 20298405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0818 - - gmx:100800423 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0818 10 20294505 20298405 Apr10g0818 10 20294505 20298405 ECH
Apr10g0818 10 20294505 20298405 Apr10g2160 10 34138836 34139427 ECH
Apr4g2105 4 29951173 29951646 Apr10g0818 10 20294505 20298405 ECH