Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2160 ATGCGCATGCTCACCGGCGATTCCACCGTCGCCGACGACAATTTCCGATTCGTTCCGCAATCAATTGCCTCCTTCGGCTCCATCGTCATCGTCGAAGGCTGCGACACTGCACGCGCCATTTCCTGGGTTCACGCTTGGACCGTCACGGATGGGATAATTACTCAAATCAGGGAGTACTTCAACACATCCCTCACTGTCACACGCATCGCCGGCACCGACGAGATCGTTCCGGTCAGTTCCGGCACCGGCCGTTTGCCCTGCGTTTGGGAGAGCAGCGTCTCCGGTCGGGTCGGGAAATCCGTGCCCGGTTTGGTCTTAGCAATATAA 327 0.578 MRMLTGDSTVADDNFRFVPQSIASFGSIVIVEGCDTARAISWVHAWTVTDGIITQIREYFNTSLTVTRIAGTDEIVPVSSGTGRLPCVWESSVSGRVGKSVPGLVLAI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2160 108 Pfam Wound-induced protein WI12 1 108 IPR009798 -
Apr10g2160 108 PIRSF Wun1 1 108 IPR016533 -
Apr10g2160 108 PANTHER SENESCENCE ASSOCIATED GENE 20 1 108 - -
Apr10g2160 108 Gene3D - 1 76 - -
Apr10g2160 108 PANTHER OS07G0691300 PROTEIN 1 108 IPR009798 -
Apr10g2160 108 SUPERFAMILY NTF2-like 2 66 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2160 Apr-Chr10 34138836 34139427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2160 - - gmx:100778637 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2105 4 29951173 29951646 Apr10g2160 10 34138836 34139427 ECH
Apr10g0818 10 20294505 20298405 Apr10g2160 10 34138836 34139427 ECH
Apr10g2160 10 34138836 34139427 Apr10g2160 10 34138836 34139427 ECH