Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0421 ATGGATAATCAGAAGGGAACGAATATTGATTTTGAGACATTCACATGGAAAATTGAAGATTTCTCTAAACAAAACACCAAGAATCTACGATCCAAGGCTTTCCGAATCCAAGGTTACAAATGGCGGATTCTTTTGTATCCATTAATGAAGAATGTTGACCATTTTTCATTATATTTGATGGTTGCGGATGCTTTACCACCGTATGGATGGAACAGAAATACGTATTTCAAGTTAGCTTTAATTAATCAGTTGAATGGCAATAAGTCAATTGTAAAGGAGACTCAGCAGAAGTTCAAAGGGGGTCATCGTAGGTGGGGCTCGTTTTTTGTGAATCTCAGTGATTTCTATGACTCAAAACAGGGCTATCTTGTGAACAACACATGCATCATTGAAGCTCATGTTTGTATCTCCCACCTCGACACCATTCAACTTAACACCTTGAACAAAATTACTCCAACCAAAGACTCTATATTAGATGATCAAGCTGCAAGTTCAAGACATTCAGAATCCACCCAGCATGATAAAGAAACAGGAACAGAAATATCAGATGAGAGTGACACACTTAGTTCAGCGACCTTTGATTCTGGTCTAACAGAAGGCAAAGTTCAAGTTTCAGATTTGACACTGAGAGACCTTATAGATTTGGAGAATTTAGGAACAGAAGAAGCAGCTTTTATTCCACTGTTGGAAGAGGCATGCATATGGCATCCTTCCCTTATAAGGAGCCAGAGAAAAAGTTCTAGATGGTTTAAATTATGGGCATTCACAACATTGGGCCAAGTTCTGCATTTTCTCAAGACAAGTAAGGTGAAAGATATGGATGAAGATGCCTGTAATCACCTTCAAGTTTTATGGGAAGAACTTGTTAAGCACTCTGGTTTTCAATTGGCTTGGCTAGAGCCTTATGTTCAATCTGCATTGGGCATGAAAGTTCATTTGAAAAGAACAACTGCAGTGAATAAACTGAAGGATTGTGTGGTTGCTTTGGAGATTAAAATGAAGAAGCTAAGGGGAGAATTGGATGCTGCAGAAGCTGAGTTTGAGGTGGCAAGGAGAGCCTTGGCTGAGGCAGGAAAAGATTTCATAGAGATAGATTTGAATGCTGAATTAGGTTATGCCATGTTTTAG 1128 0.3883 MDNQKGTNIDFETFTWKIEDFSKQNTKNLRSKAFRIQGYKWRILLYPLMKNVDHFSLYLMVADALPPYGWNRNTYFKLALINQLNGNKSIVKETQQKFKGGHRRWGSFFVNLSDFYDSKQGYLVNNTCIIEAHVCISHLDTIQLNTLNKITPTKDSILDDQAASSRHSESTQHDKETGTEISDESDTLSSATFDSGLTEGKVQVSDLTLRDLIDLENLGTEEAAFIPLLEEACIWHPSLIRSQRKSSRWFKLWAFTTLGQVLHFLKTSKVKDMDEDACNHLQVLWEELVKHSGFQLAWLEPYVQSALGMKVHLKRTTAVNKLKDCVVALEIKMKKLRGELDAAEAEFEVARRALAEAGKDFIEIDLNAELGYAMF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0421 375 MobiDBLite consensus disorder prediction 160 193 - -
Apr4g0421 375 MobiDBLite consensus disorder prediction 160 182 - -
Apr4g0421 375 Coils Coil 319 360 - -
Apr4g0421 375 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 355 - -
Apr4g0421 375 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 355 - -
Apr4g0421 375 CDD MATH 13 134 IPR002083 GO:0005515
Apr4g0421 375 Pfam MATH domain 18 136 IPR002083 GO:0005515
Apr4g0421 375 SUPERFAMILY TRAF domain-like 13 136 - -
Apr4g0421 375 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Apr4g0421 375 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 178 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0421 Apr-Chr4 3583340 3585613 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0421 - - gmx:102664376 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0421 4 3583340 3585613 Apr8g0719 8 6939195 6942915 PCT
Apr8g0720 8 6946041 6947865 Apr4g0421 4 3583340 3585613 PCT