Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0720 ATGAAATTAGTGAATGATTTAATTGTACTGTGCATCTCTTCATCATGTCACAGGAGGATCCTTGTGTATCCACTGAGGAGGGATGTTACCCATTTTTCATTGTATTTGATGGTTGATGATTCTTTACCACCGTATGGATGGAGCAGAAACACGTTTTTCAAGTTAGCTCTAATTAATCAAGTGGATCGGAAGAAGTCAATTGTAAAGGAGACTCAACAAAAGTTCAATGGAGGACATCGTAGCTGGGGTTCATTTTTTCTAAATCTGAGTGATTTCTACGACCATAAACAAGGGTATCTTGTGAGGAACACATGCATCATTGAAGCTTATATTTGTGTCTCTGATTTTGCTCCTAAGATTCAAGTTTACCCAAATTGTGGTCCAACCCATGATTCTACATTAGGTGATCAAGCAACAGAATCATCATCGGATACAATTAGTCCTAGAACCTCAGGATCTAGTCCAATAACAGAAGGGGAAGTTCAAGATTTGACACTAAGAGAACTAATAGATTTGGAAAGTTTAGGAGCAGAAGAAAAAGCTTTTATTCCACTATTGGAGGAGGTTTGCATATGGCACCCTTCCCTAATGCAGTGCCAGAGCAAAAGGACTCTAAGGTTTAGACAATGGGCCTTTACATCTTTGGGCCAAGTTTTGCATTTTCTCAAGACAAAGAAGGTGAAAGATATAAGTGAGGAGGACATAAAGCACCTTCAAGGTTTGTGGAAGGAACTTATCAAGTCTTCAGGATTTGACTTGGCTTGGTTGGAGCCTTATGTTCAATCAGTATTGGGTGTGAAAGCTTATTTTGAAAGAGCAAAGCAATTGAAGAAACTAAAGGACAATGTGGTTGCTTTGGAGATTAAGATGAAGAAGCTGAGGGGTGAACTTGCTGCTGCTGAAGGGGAGTTTGAGGTGGCAAGGAGAGGGTTGTCAGAAGTAAGAAAAGGTTTCCATGAGATGGATGTAAATGCTGCAATAGGGTATGCTATGTTTTAG 999 0.3964 MKLVNDLIVLCISSSCHRRILVYPLRRDVTHFSLYLMVDDSLPPYGWSRNTFFKLALINQVDRKKSIVKETQQKFNGGHRSWGSFFLNLSDFYDHKQGYLVRNTCIIEAYICVSDFAPKIQVYPNCGPTHDSTLGDQATESSSDTISPRTSGSSPITEGEVQDLTLRELIDLESLGAEEKAFIPLLEEVCIWHPSLMQCQSKRTLRFRQWAFTSLGQVLHFLKTKKVKDISEEDIKHLQGLWKELIKSSGFDLAWLEPYVQSVLGVKAYFERAKQLKKLKDNVVALEIKMKKLRGELAAAEGEFEVARRGLSEVRKGFHEMDVNAAIGYAMF* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0720 332 Pfam MATH domain 27 111 IPR002083 GO:0005515
Apr8g0720 332 SUPERFAMILY TRAF domain-like 19 114 - -
Apr8g0720 332 CDD MATH 19 111 IPR002083 GO:0005515
Apr8g0720 332 ProSiteProfiles MATH/TRAF domain profile. 1 111 IPR002083 GO:0005515
Apr8g0720 332 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 131 IPR008974 GO:0005515
Apr8g0720 332 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 15 314 - -
Apr8g0720 332 Coils Coil 276 303 - -
Apr8g0720 332 MobiDBLite consensus disorder prediction 131 157 - -
Apr8g0720 332 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 15 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0720 Apr-Chr8 6946041 6947865 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0720 - - gmx:100797919 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0720 8 6946041 6947865 Apr4g0421 4 3583340 3585613 PCT