Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0296 ATGATGCAGACGGAGCAACAACAGAACAACCAGTTGGTAGTTCAGAATTCGGGAAGCCTCAGCTTCAGCAGCCATTTGTCCAAGGAAGATGAGGAGATGTCAAGGTCTGCTCTTTCAACCTTCAGAGCCAAGGAAGAAGAGATTGAGAGGAAGAAGATGGAGGTAAGAGAGAAGGTTCAGCTTCAGTTGGGTCGCGTTGAAGAAGAAACCAAGCGTCTTGCTACCATTCGTGAGGAGCTAGAAGCCCTGGCAGATCCAATGAGGAAGGAAGTTGCACTTGTTAGAAAAAGGATTGATTCTGTAAACAAAGAATTAAAGCCACTGGGTCATACCTGCCAGAAGAAGGAGAAAGAATACAAAGAAGCTCTTGAAGCTTTTAATGAAAAGAACAAGGAAAAAGTACAGTTAATCACCAGGTTAATGGAGCTTGTTAGTGAAAGTGAAAGATTGAGGATGAAGAAGCTGGAGGAGCTGAGTAAGAATATAGACTCCCTGCAATGA 501 0.4351 MMQTEQQQNNQLVVQNSGSLSFSSHLSKEDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEETKRLATIREELEALADPMRKEVALVRKRIDSVNKELKPLGHTCQKKEKEYKEALEAFNEKNKEKVQLITRLMELVSESERLRMKKLEELSKNIDSLQ* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0296 166 MobiDBLite consensus disorder prediction 1 24 - -
Apr4g0296 166 Coils Coil 155 166 - -
Apr4g0296 166 PANTHER RAB6-INTERACTING PROTEIN GORAB 4 164 IPR007033 -
Apr4g0296 166 MobiDBLite consensus disorder prediction 1 46 - -
Apr4g0296 166 Coils Coil 112 132 - -
Apr4g0296 166 PANTHER EXPRESSED PROTEIN 4 164 - -
Apr4g0296 166 Coils Coil 38 58 - -
Apr4g0296 166 MobiDBLite consensus disorder prediction 25 46 - -
Apr4g0296 166 Pfam Transcriptional activator 15 164 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0296 Apr-Chr4 2503866 2507135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0296 - - gmx:100499923 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0296 4 2503866 2507135 Apr8g1897 8 29459134 29460645 ECH
Apr4g0296 4 2503866 2507135 Apr4g0296 4 2503866 2507135 ECH
Apr4g0296 4 2503866 2507135 Apr3g1268 3 27147748 27152156 ECH