Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1897 ATGGGCCTAGTCTGTAGCAATAGAGAGGAAATGCAGAAAATGAAGAACCTTGGGAGTATTGGAAGCAGTGGGAGGCTATCAACAGAAGAGTGTGAAGATGAGGAAGTTTCAAAATTGGCCATTTCAACATTTCAATCTAAGGAAGAAGAGATTGAGAGGAAAAAGATGGAGGTGAGAGAGAAGGTTGAACTTCAACTTGGTCGTGCTGAAGAAGAGACAAGGCGCTTGGCACACATTTGGGAAGAGCTTGAAGTGCTGGATGATCCTATGCGGAAGGAAGTTGCAATGGTACGCAAGAAGATTGACTTGGCTAACAGAGATTTAAAGCCACTGGGACTGAACTACCAGAAAAAGGAAAAGGAGTATAAAGAAGCCTTGGAAGCTTTCAATGAAAAGAACAAAGAGAAGGCTCACCTGGTAGCCACACTAATTGAGTTGCTGACTGAGAGTGAAAGACTGAGGATGAAGAAATTGGAGGAGCTATGCAAGACCATAGAATCTATGTCACTGAAACCATGA 519 0.4297 MGLVCSNREEMQKMKNLGSIGSSGRLSTEECEDEEVSKLAISTFQSKEEEIERKKMEVREKVELQLGRAEEETRRLAHIWEELEVLDDPMRKEVAMVRKKIDLANRDLKPLGLNYQKKEKEYKEALEAFNEKNKEKAHLVATLIELLTESERLRMKKLEELCKTIESMSLKP* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1897 172 PANTHER RAB6-INTERACTING GOLGIN (DUF662) 11 168 - -
Apr8g1897 172 Coils Coil 41 61 - -
Apr8g1897 172 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 168 IPR007033 -
Apr8g1897 172 Pfam Transcriptional activator 15 167 IPR007033 -
Apr8g1897 172 Coils Coil 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1897 Apr-Chr8 29459134 29460645 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1897 - - gmx:100794044 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0296 4 2503866 2507135 Apr8g1897 8 29459134 29460645 ECH
Apr8g1897 8 29459134 29460645 Apr8g1897 8 29459134 29460645 ECH