Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1268 ATGGCAACACCAAATCAGTCATATGAACAACAACTAAGTGTGCAGCGAGTTAGGAACTCAGGGATGATTAGCTCTAACCAGAGTCCAATGAGGGATGACAAGGAAGAGGAGATGTCAAGATCAGCTCTAGCAATGTTCCGAGCCAAGGAAGAAGAAATTGAGAGGAAAAAAATGGAGGTGAGGGATAAGGTTCATACTTATTTGGGTCGAGTCGAGGAGGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAACTTGAGGGTCTCACAGATCCATTGAGGAAGGAAGTTGCAATAGTTAGAAAGAAGATAGACAGTGTTAACAAAGAGTTAAAGCCCCTGGGCCAAACCTGCCAGAGAAAGGAGAGAGAATACAAGGAAGCCCTTGAAGCCTTCAATGAGAAAAACAAGGAAAAAGCTCAACTTGTTACTAAATTAATGGAGCTGGTGACTGAAAGCGAGAGGATGAGGATGAAGAAGCTGGAGGAGTTAAGCAAAAACGTAGATACCTTGCATTAA 516 0.4302 MATPNQSYEQQLSVQRVRNSGMISSNQSPMRDDKEEEMSRSALAMFRAKEEEIERKKMEVRDKVHTYLGRVEEETKRLAEIREELEGLTDPLRKEVAIVRKKIDSVNKELKPLGQTCQRKEREYKEALEAFNEKNKEKAQLVTKLMELVTESERMRMKKLEELSKNVDTLH* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1268 171 PANTHER - 6 170 - -
Apr3g1268 171 Pfam Transcriptional activator 18 169 IPR007033 -
Apr3g1268 171 MobiDBLite consensus disorder prediction 1 41 - -
Apr3g1268 171 MobiDBLite consensus disorder prediction 1 28 - -
Apr3g1268 171 PANTHER RAB6-INTERACTING PROTEIN GORAB 6 170 IPR007033 -
Apr3g1268 171 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1268 Apr-Chr3 27147748 27152156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1268 - - gmx:100796368 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g1268 3 27147748 27152156 Apr3g1268 3 27147748 27152156 ECH
Apr4g0296 4 2503866 2507135 Apr3g1268 3 27147748 27152156 ECH