Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0197 ATGGAGACACGAAGTGAGATAAGGCATTCAAAGTTCAAGAGAATTTGTGTGTTCTGTGGGAGTAGCCCCGGCAAGAAGAGTAGCTATCAAGATGCTGCTATTCAACTTGGCAATGAATTGGTATCAAGGAACATTGATCTGGTGTATGGAGGTGGAAGCATTGGTCTCATGGGTTTGGTTTCGCAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGAGTTATTCCCAAGACACTTATGCCTCGAGAGCTAACTGGTGAAACTGTAGGAGAAGTAAAAGCTGTTGCTGATATGCACCAAAGGAAGGCTGAGATGGCTAAGCATTCAGATGCCTTTATTGCCTTACCAGGTGGATATGGGACTCTAGAGGAGCTTCTTGAAGTCATAACCTGGGCACAACTTGGGATTCATGACAAGCCGGTGGGATTAGTAAATGTTGATGGGTACTTCAATTCGTTGCTGTCATTTATTGACAAAGCTGTGGAAGAGGGATTTATTAGTCCAAATGCACGCCACATAATTGTATCAGCACCAACAGCAAAAGAATTGGTGAAGAAATTGGAGGATTATGTACCCTGTCATGAGGGTGTTGCTTCCAAGTTGAGCTGGCAGATGGAACAGCAACTCGCTTACCCTCAAGATTATGACATGTCAAGGTAG 660 0.4439 METRSEIRHSKFKRICVFCGSSPGKKSSYQDAAIQLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEDYVPCHEGVASKLSWQMEQQLAYPQDYDMSR* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0197 219 PANTHER LOG FAMILY PROTEIN YJL055W 1 219 - -
Apr4g0197 219 SUPERFAMILY MCP/YpsA-like 11 190 - -
Apr4g0197 219 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Apr4g0197 219 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 1 219 - -
Apr4g0197 219 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
Apr4g0197 219 Gene3D - 2 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0197 Apr-Chr4 1612657 1616568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0197 K22522 - gmx:100810030 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0197 4 1612657 1616568 Apr2g0805 2 11410595 11412216 ECH
Apr4g0197 4 1612657 1616568 Apr5g0642 5 8810662 8812129 ECH
Apr4g0197 4 1612657 1616568 Apr4g0197 4 1612657 1616568 ECH