Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0805 ATGGAAGAAGGAAGGGTGTCTTCAGGAAATGAGAACCAAAGCAGGTTCAAAAGGATATGTGTTTTCTGTGGTAGTAGAGTTGGACACAAGTCTGCATTCAGTGATGCTGCTCTTGAGCTTGGTAAATTGATGGTTGAAAGGAGAATTGATTTAGTCTATGGAGGAGGAAGCTTAGGACTAATGGGTTTGATCTCTCAGACTGTGTTAAATGGAGGTTGCCATGTTCTTGGAGTGATTCCTGAAGCTCTATTGCCTCCTGAGATATCTGGAGAAACTTTTGGAGAAGTGAAAGCAGTTGCCGATATGCATGAAAGGAAGTCAATAATGTATGAACAAGCTGATGCATTCATAGCACTTCCTGGAGGCTATGGAACCATGGAAGAGCTGCTAGAAGTGATAGCTTGGTCTCAATTGGGAATACATGACAAACCAGTGGGATTGTTGAATGTAGATGGGTATTTCAATAGCTTGTTGAGCCTATTTGATAAGGGAGTGGAAGAGGGTTTTATAGAAAACTCTGCAAGGCATATTGTGGTCATAGCAGACACAGTAATAGAACTCATAAAGAAAATGGAGGAATATGTTCCTCCAGTCCATGGCATAGTTGCACAAAAATAA 618 0.411 MEEGRVSSGNENQSRFKRICVFCGSRVGHKSAFSDAALELGKLMVERRIDLVYGGGSLGLMGLISQTVLNGGCHVLGVIPEALLPPEISGETFGEVKAVADMHERKSIMYEQADAFIALPGGYGTMEELLEVIAWSQLGIHDKPVGLLNVDGYFNSLLSLFDKGVEEGFIENSARHIVVIADTVIELIKKMEEYVPPVHGIVAQK* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0805 205 PANTHER LOG FAMILY PROTEIN YJL055W 9 198 - -
Apr2g0805 205 TIGRFAM TIGR00730: TIGR00730 family protein 17 194 IPR005269 GO:0009691|GO:0016787
Apr2g0805 205 Pfam Possible lysine decarboxylase 61 191 IPR031100 -
Apr2g0805 205 SUPERFAMILY MCP/YpsA-like 15 194 - -
Apr2g0805 205 Gene3D - 5 193 - -
Apr2g0805 205 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATED 9 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0805 Apr-Chr2 11410595 11412216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0805 K22522 - gmx:100783827 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0805 2 11410595 11412216 Apr5g0642 5 8810662 8812129 ECH
Apr4g0197 4 1612657 1616568 Apr2g0805 2 11410595 11412216 ECH
Apr8g0489 8 4229899 4234309 Apr2g0805 2 11410595 11412216 ECH
Apr2g0805 2 11410595 11412216 Apr2g0805 2 11410595 11412216 ECH