Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0009 ATGAATGCTAGACGAGACAATCGTAACAATAGAGTTGCCCTTTTTGATGGTATCGAGGAGGGTGGCATCAGAGCATCATCTCTTTACTCCTCTTCTCATGAAATTGATGAACTCGATAATGAGCAGGCTTTGGATGGATTGCAAGGCAGAGTCAATCTGCTGAAAAGACTATCAGGTGATATACATGAGGAGGTGGATAGCCATAACCGCATGCTGGATCGAATGGGGAGTGATATGGATGCATCAAGAGGAGTCCTCGCGGGCACAATGGACAAATTTAAAATGGTATTCGAGACCAAATCCAGCCGGAGAATGTTTACGCTTGTGGTATCCTTTGTTGTGCTTTTTCTTATAATATACTACCTGACTAGGTAA 375 0.432 MNARRDNRNNRVALFDGIEEGGIRASSLYSSSHEIDELDNEQALDGLQGRVNLLKRLSGDIHEEVDSHNRMLDRMGSDMDASRGVLAGTMDKFKMVFETKSSRRMFTLVVSFVVLFLIIYYLTR* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0009 124 Gene3D - 42 105 - -
Apr4g0009 124 SMART tSNARE_6 29 96 IPR000727 -
Apr4g0009 124 SUPERFAMILY SNARE fusion complex 31 96 - -
Apr4g0009 124 PANTHER GOLGI SNARE BET1-RELATED 1 124 IPR039897 GO:0015031|GO:0030173
Apr4g0009 124 CDD SNARE_Bet1 37 94 IPR039899 -
Apr4g0009 124 PANTHER BET1-LIKE SNARE 1-1 1 124 - -
Apr4g0009 124 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 34 96 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0009 Apr-Chr4 113629 116808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0009 K08504 - gmx:100814836 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0009 4 113629 116808 Apr4g0009 4 113629 116808 ECH
Apr4g0009 4 113629 116808 Apr8g1076 8 14198696 14203530 PCT
Apr8g0309 8 2587557 2590727 Apr4g0009 4 113629 116808 PCT