Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g0309 ATGAATGCCAGAAGAGACAACCGCAACAACCGAGTTGCTCTTTTTGATGGTATTGAGGAGGGTGGCATCAGAGCATCATCTCTTTACTCCTCAACTTCTTCCCATGAAATTGATGAACATGACAATGAACAAGCATTGGATGGATTGCAAGATAGAGTCAATCTGCTGAAAAGATTGTCAGGTGATATAAATGAGGAAGTGGATAGTCATAACCGCATGCTGGATCGAATGGGAAATGATATGGATTCTTCAAGAGGAGTCCTCTCAGGCACCATGGATAAATTCAAAATGGTCTTTGAGACAAAATCCAGCCGAAGAATGTTTTCACTTGTAGCATCCTTTGTTGTGATTTTTCTTATAATATACTATCTGACTAGGTAA 381 0.3963 MNARRDNRNNRVALFDGIEEGGIRASSLYSSTSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVASFVVIFLIIYYLTR* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g0309 126 SUPERFAMILY SNARE fusion complex 33 98 - -
Apr8g0309 126 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 36 98 IPR000727 -
Apr8g0309 126 PANTHER BET1-LIKE SNARE 1-1 1 126 - -
Apr8g0309 126 CDD SNARE_Bet1 39 96 IPR039899 -
Apr8g0309 126 SMART tSNARE_6 31 98 IPR000727 -
Apr8g0309 126 Gene3D - 44 107 - -
Apr8g0309 126 PANTHER GOLGI SNARE BET1-RELATED 1 126 IPR039897 GO:0015031|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g0309 Apr-Chr8 2587557 2590727 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g0309 K08504 - gmx:100500329 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0309 8 2587557 2590727 Apr8g0309 8 2587557 2590727 ECH
Apr8g0309 8 2587557 2590727 Apr4g0009 4 113629 116808 PCT