Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr8g1076 ATGAGTTACAGAAGAGATGGTCGCTCCTCCAGATCATCACTTGTAGATGGTTTTGATAGTCTGGAGGAAGGTGGTCTAAGGGCTTCTTCTTCTTACTCACGAGAAATTAATGAGCATGATAATGAAAAGGCCATAGAGAGTTTGCATGACAGAGTATCTTTTCTGAAACAATTAACAGGTGATATACATGAGGAGGTAGAGAGTCATAATCAGTTGCTTGATCGGGTGGGTAACAAAATGGATGGATCAAGGGGTATGATGTTGGGAACCATGGACCGATTCAAGAAGGTTTTTGAGAAGAAATCGACACGGAAAACATGCTCACTTGCAGCTTATTTCACTTTTGCCTTCATATTCATATACTATCTTATTAGGATGCTTGGATATTTTACACTTGGGTAA 402 0.3955 MSYRRDGRSSRSSLVDGFDSLEEGGLRASSSYSREINEHDNEKAIESLHDRVSFLKQLTGDIHEEVESHNQLLDRVGNKMDGSRGMMLGTMDRFKKVFEKKSTRKTCSLAAYFTFAFIFIYYLIRMLGYFTLG* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr8g1076 133 PANTHER GOLGI SNARE BET1-RELATED 1 127 IPR039897 GO:0015031|GO:0030173
Apr8g1076 133 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 35 97 IPR000727 -
Apr8g1076 133 PANTHER BET1-LIKE SNARE 1-2 1 127 - -
Apr8g1076 133 CDD SNARE_Bet1 38 96 IPR039899 -
Apr8g1076 133 SUPERFAMILY SNARE fusion complex 34 97 - -
Apr8g1076 133 Gene3D - 43 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr8g1076 Apr-Chr8 14198696 14203530 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr8g1076 K08504 - gmx:100818014 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0009 4 113629 116808 Apr8g1076 8 14198696 14203530 PCT