Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0266 ATGGAGCAGGGTGGCAAAGAAGACCAGAAGACTATGTTCAACAAATATGCCTTTGCTTGTGCTATAGTTGCTTCAATGGTGTCCATCATATCTGGTTATGACACCGGTGTTATGAGTGGAGCCATGATATTCATTAAGGATGATATTGGAATCAGTGATACCCAACAAGAGGTTCTAGCAGGAATCTTAAACCTATGCGCATTGGTGGGATCCTTAGCTGCTGGAAGAACCTCTGATTACATTGGTCGCCGCTACACAATATTCTTAGCCTCTGTCCTCTTCATGGTAGGTGCAATTCTCATGGGGTATGGCCCAAACTATGCAATTTTAATGGTTGGTAGGTGTGTTGGTGGTGTTGGTGTGGGCTTTGCTCTTATGATAGCACCTGTTTACTCAGCAGAGATTTCCTCTGCATCATCAAGGGGTCTTCTAACCTCTTTACCTGAGCTCTGCATTGGCATTGGGATCTTACTTGGCTATGTATCAAACTACTTCTTGGGGAAATTGGCATTGAAACTTGGGTGGAGATTGATGCTTGGTATTGCAGCATTTCCTTCACTTGCTTTGGCTTTGGGTATTCTAACAATGCCAGAGTCACCAAGGTGGTTAGTGATGCAAGGTCAACTAGGAAATGCCAAGAAGGTCCTATTGCAAGTTTCTAATAGCACCCAAGAGGCTGAACTTCGTTTCAGGGAAATAAAAGTTGCTGTTGGTTTTGATGAGAATTGTGATGATGAGATTGCAAACGTGAAGCACCCTCAAGGGTCACGCAATGGTGAAGGGGTTTGGAAAGAGTTGCTTGTGAGGCCTACACCTCAAGTTCGTTGGATGCTGATTGCTGCAGTTGGGATTCACTTCTTTGAGCATGCAACTGGCATTGAAGCTGTGATGTTATATAGCCCAAGAATCTTCAAGAAAGCTGGTGTGACAAGTAAGGATAAGCTCTTACTTGCAACCGTTGGAGTTGGTCTTACAAAGATCACTTTCTTGATCATAGCCTCGTTCTTGCTTGATAAAGTTGGTAGAAGGCGCCTCTTGCAAATAAGCACAGGGGGAATGATTTGTGGCCTGTCACTTTTGGGTTTCAGCTTGACCATGGTTGATCATTCCAATGAGAAGCTTTTGTGGGCCTTGAGTCTTAGCATTGTGGCCACATATGCTTATGTTGCTTTCTTTAATATTGGGCTTGGGCCTGTTACTTGGGTCTATAGCTCAGAGATATTCCCTATGAAGTTGAGGGCACAAGGGGCAAGCATAGGAGTTGCGGTGAATAGGACAATGAATGCTGCTGTTTCCATGAGCTTTATTTCAATCTATAAAGCAATAACTATAGGTGGGAGCTTTTTCATGTTTGCTGGTATATCGGTGCTGGCTTGGGTGTTCTTCTACATTTTCCTTCCTGAAACCAAAGGCGTGGCCTTGGAAGAGATGGAGCTGCTTTTCAGCAAAAAAATCCAGTGGTAG 1464 0.4399 MEQGGKEDQKTMFNKYAFACAIVASMVSIISGYDTGVMSGAMIFIKDDIGISDTQQEVLAGILNLCALVGSLAAGRTSDYIGRRYTIFLASVLFMVGAILMGYGPNYAILMVGRCVGGVGVGFALMIAPVYSAEISSASSRGLLTSLPELCIGIGILLGYVSNYFLGKLALKLGWRLMLGIAAFPSLALALGILTMPESPRWLVMQGQLGNAKKVLLQVSNSTQEAELRFREIKVAVGFDENCDDEIANVKHPQGSRNGEGVWKELLVRPTPQVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKAGVTSKDKLLLATVGVGLTKITFLIIASFLLDKVGRRRLLQISTGGMICGLSLLGFSLTMVDHSNEKLLWALSLSIVATYAYVAFFNIGLGPVTWVYSSEIFPMKLRAQGASIGVAVNRTMNAAVSMSFISIYKAITIGGSFFMFAGISVLAWVFFYIFLPETKGVALEEMELLFSKKIQW* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0266 487 ProSitePatterns Sugar transport proteins signature 2. 116 141 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr3g0266 487 PRINTS Sugar transporter signature 28 38 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0266 487 PRINTS Sugar transporter signature 111 130 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0266 487 PRINTS Sugar transporter signature 288 298 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0266 487 PRINTS Sugar transporter signature 382 403 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0266 487 PRINTS Sugar transporter signature 405 417 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr3g0266 487 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 485 IPR045262 GO:0015144
Apr3g0266 487 ProSitePatterns Sugar transport proteins signature 1. 74 91 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr3g0266 487 Pfam Sugar (and other) transporter 20 481 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr3g0266 487 ProSitePatterns Sugar transport proteins signature 1. 333 350 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr3g0266 487 Gene3D MFS general substrate transporter like domains 9 485 IPR036259 -
Apr3g0266 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 20 470 IPR020846 GO:0022857
Apr3g0266 487 PANTHER POLYOL TRANSPORTER 3-RELATED 9 485 - -
Apr3g0266 487 SUPERFAMILY MFS general substrate transporter 7 478 IPR036259 -
Apr3g0266 487 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 477 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0266 Apr-Chr3 5205513 5207474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0266 7 481 Organic Solute Cotransporters AT2G18480 72.479 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0266 - - gmx:100806930 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0266 3 5205513 5207474 Apr7g1007 7 17119775 17123033 ECH
Apr3g0266 3 5205513 5207474 Apr3g0266 3 5205513 5207474 ECH
Apr7g1007 7 17119775 17123033 Apr3g0266 3 5205513 5207474 PCT
Apr3g0266 3 5205513 5207474 Apr7g1008 7 17127335 17129469 PCT