Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1007 ATGGAAAACGGTAATGATGGAAATGGGAACAGAAGGTTCAACAAGTATGCCTGTGGTTCAGTGATGGCTGCCTCTATTGTCTCTGCTATATATGGTTACGTTGTTGGAGTGATGGCTGGAGCACTGGTATTTATAAACGAAGATCTTAAAATCAGTGACCTAAAAGTGCAGTTCCTAGTGAGCATGTCACACGTGTGTGCACTACCAGGATGCATGGCCGCTGGAAGAACTTCTGATTACAAAGGTCGTCGTTGCACCATTATTCTAGCTTCCATCATTTTCTTCTTGGGCTCAATTGTAATGGCCGGTGGCCCATCCTATCCAATCTTAATAATTGGAGGCTGCATTGTTGGATTTGGTGTGGGTTTTGCACTGATTGTTGCACCAGTTTATAGTGCAGAAATTTCACCTCCTTCCTATAGAGGCTTTCTCACCTCTCTTCCAGAACTTTCCATAAACTTAGGACTCTTACTTGGCTATGTCTCAAACTACTTTCTTGGAAAATTGTCTCTTAAACTTGGTTGGAGATTGATGGTGGGTATCCCTGCAATTCCTTCATTTGGTTTAATCATTTTAATGTTGAAATTGGTAGAGTCACCAAGGTGGTTAATCATGCAAGGACGTGTAGGTGAGGCTAGGAAAGTGCTTTTACTAGTATCTAATACAAAGGAAGAAGCTGAACAACGCTTGAAGGAAATAAAAGCTGTTGTTGGCATTGATGAAAACTGCACTCAACACATTGTGGAAGTTACAAAGAAAACTAGTAGCGGTTCAGGAGCTCTTAAGGAACTTTTTTGTAAACCTTCACCTCCTGTGCGTAGGATACTACTTGCGGCAATTGGAGTTCATGTTTTGTTGCAGATTGGAGGAATTGCAGCTATTTTGTTATATGGTCCAAGAATCTTTCAGAGAGCAGGAATCATTGAGAATAGTAAGCTCATGCTAGCCACAGTTGGTATTGGAGTCAGCAAATTTGTATTTACATTCATGTCAATATTTTTGTTGGATAGAGTTGGGAGGAGAATTCTCTTGTTGATTAGTTCAGGAGGCATGGTTGTGACCCTATTAGGGATGGGTATTTGCTTGACTGTAGCAGAGCATTCCACAGAAAAAGTACAGTGGGTGATAAACTTTACCATTGTTGCTACCTACATCTTTGTGGCTTTTATGTCTATTGGAATTGGACCAGTGACATGGGTTTATAGTTCAGAGATTTTTCCCCTTAGGTTCAGAGCACAAGGTCTTGGTGTTTGTGCTGCCGTGAACAGAATTACAAATGTGGCAGTAGTTTCAACTTTCATTTCAATTTATAAAGCAATAACAATGGGGGGGATTTTCTTTATGTTTGCAAGTATCAATGCTATGGCTTGGTGCTTCTACTATTTCTTGCCAGAAACTAAAGGAAGATCATTAGAAGATATGGAGACCATCTTTGGGAAAAATTCCAAGTTGGAGATACAAACGCTGCCCGAGTACAACAAATAA 1485 0.4034 MENGNDGNGNRRFNKYACGSVMAASIVSAIYGYVVGVMAGALVFINEDLKISDLKVQFLVSMSHVCALPGCMAAGRTSDYKGRRCTIILASIIFFLGSIVMAGGPSYPILIIGGCIVGFGVGFALIVAPVYSAEISPPSYRGFLTSLPELSINLGLLLGYVSNYFLGKLSLKLGWRLMVGIPAIPSFGLIILMLKLVESPRWLIMQGRVGEARKVLLLVSNTKEEAEQRLKEIKAVVGIDENCTQHIVEVTKKTSSGSGALKELFCKPSPPVRRILLAAIGVHVLLQIGGIAAILLYGPRIFQRAGIIENSKLMLATVGIGVSKFVFTFMSIFLLDRVGRRILLLISSGGMVVTLLGMGICLTVAEHSTEKVQWVINFTIVATYIFVAFMSIGIGPVTWVYSSEIFPLRFRAQGLGVCAAVNRITNVAVVSTFISIYKAITMGGIFFMFASINAMAWCFYYFLPETKGRSLEDMETIFGKNSKLEIQTLPEYNK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1007 494 ProSitePatterns Sugar transport proteins signature 2. 116 141 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr7g1007 494 ProSiteProfiles Major facilitator superfamily (MFS) profile. 20 468 IPR020846 GO:0022857
Apr7g1007 494 Coils Coil 216 236 - -
Apr7g1007 494 ProSitePatterns Sugar transport proteins signature 1. 331 348 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr7g1007 494 Gene3D MFS general substrate transporter like domains 9 482 IPR036259 -
Apr7g1007 494 Pfam Sugar (and other) transporter 22 478 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr7g1007 494 TIGRFAM SP: MFS transporter, sugar porter (SP) family 15 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1007 494 PRINTS Sugar transporter signature 28 38 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1007 494 PRINTS Sugar transporter signature 111 130 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1007 494 PRINTS Sugar transporter signature 380 401 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1007 494 PRINTS Sugar transporter signature 403 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1007 494 SUPERFAMILY MFS general substrate transporter 11 475 IPR036259 -
Apr7g1007 494 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 10 483 - -
Apr7g1007 494 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 10 483 IPR045262 GO:0015144
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1007 Apr-Chr7 17119775 17123033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1007 1 481 Organic Solute Cotransporters AT4G36670 53.527 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1007 - - gmx:100786855 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0266 3 5205513 5207474 Apr7g1007 7 17119775 17123033 ECH
Apr7g1007 7 17119775 17123033 Apr7g1007 7 17119775 17123033 ECH
Apr7g1007 7 17119775 17123033 Apr3g0266 3 5205513 5207474 PCT