Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1008 ATGGAGCTACGTAGTGAAGAGGACAAGTTCAACAAGTATGCTTTTGCATGTGCTGTAGTCGCTTCCATGATATCTATAATATTTGGCTATGATACGGGTGTTATGAGTGGAGCCATGATATTCATAAAGGACGAGCTCAAAATCAGCGACACCCAGCAAGAAGTTCTAGCAGGAATCTTAAACCTTTGTGCACTGGTAGGATCCTTAATAGCTGGTAGAACCTCTGATTGCATTGGTCGACGCTACACAATTGCGTTAGCCTCTGTCCTTTTCATGGTTGGTTCAGTTCTAATGGGATATGGCCCAAACTATGCAATTTTAATGTTGGGAAGGTGTGTTGCTGGAATTGGCGTGGGTTTTGCTCTTTTGATAGCGCCAGTTTATTCGGTAGAAATCTCCTCTGCTAAATCTAGAGGCTTTCTATCTTCCCTGCCAGAGCTTTGTATTGGTATTGGGATTTTACTTGGTTACATTGCTAACTACTTATTAGGGAAATTGACTTTGAAGCTTGGATGGAGATTGATGCTAGGTATTGCAGCAATCCCTTCACTTGCATTGGCTATGGGAATTCTCACAATGCCAGAATCTCCACGGTGGTTGGTGATGCAAGGGCATTTAGGAAAAGCCAAGAAGGTTTTATTGCAAGTTTCAAATACCGAACAAGAAGCCGAACTTCGCTTCAAGGATATAAAAATTGCTTCTGGGATTGACGAGAATTGCCAAGAAGAGACAGTTAAGGTCACTCAAAAGAACCATGGTGAAGGGGTTTGGAAAGAGTTGCTTGTGAGGCCCTCTAGTTCAGTTCGTTGGATGCTGATTGCAGCTGTGGGGATTCACTTCTTCGAGCATGCAACTGGAATAGAAGCTGTGATGCTATATAGTCCAAGAATCTTCAAAAAATCAGGTGTTACTAGTAAGGACAAGCTCTTGTTGACCACAATTGGAGTGGGTCTTACAAAAATTATTTTCCTGATATTAGCAACATTTTTGCTTGATAGAGTTGGAAGAAGACGTCTCTTGCTTATAAGCACAGGAGGAATGGTTTGTGGGCTTCTGGTGTTAGGATTCAGCTTGACCGTGGTGGATAATTCCCAAGAAAAGCTTGTGTGGGCCTTGACCCTTAGCATTGTGGCTACTTATGCTTTTGTTGCATTTTTTAATATTGGGCTGGGTCCTGTTACATGGGTCTATAGTTCAGAGATTTTTCCTTTGAAGTTGAGAGCACAAGGAGCAAGCATTGGAGTTGCAGTGAACAGGGTCATGAATGCTGCTGTTTCCATGAGTTTTATTTCAATCTACAAAGCAATCACCATTGGTGGGAGCTTTTTCATGTTTGCTGGTATTTCCATATTAGCTTGGTTGTTCTTCTGTTTTTTCCTGCCTGAAACCAAGGGCAGGGCCTTGGAAGAGATGGAGATGGTTTTCGGCCAAAAGTCTAGTAGAAATAAAGCTGCACAAACTGATCTGAGACAGAATGCGTAA 1482 0.4224 MELRSEEDKFNKYAFACAVVASMISIIFGYDTGVMSGAMIFIKDELKISDTQQEVLAGILNLCALVGSLIAGRTSDCIGRRYTIALASVLFMVGSVLMGYGPNYAILMLGRCVAGIGVGFALLIAPVYSVEISSAKSRGFLSSLPELCIGIGILLGYIANYLLGKLTLKLGWRLMLGIAAIPSLALAMGILTMPESPRWLVMQGHLGKAKKVLLQVSNTEQEAELRFKDIKIASGIDENCQEETVKVTQKNHGEGVWKELLVRPSSSVRWMLIAAVGIHFFEHATGIEAVMLYSPRIFKKSGVTSKDKLLLTTIGVGLTKIIFLILATFLLDRVGRRRLLLISTGGMVCGLLVLGFSLTVVDNSQEKLVWALTLSIVATYAFVAFFNIGLGPVTWVYSSEIFPLKLRAQGASIGVAVNRVMNAAVSMSFISIYKAITIGGSFFMFAGISILAWLFFCFFLPETKGRALEEMEMVFGQKSSRNKAAQTDLRQNA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1008 493 PRINTS Sugar transporter signature 25 35 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1008 493 PRINTS Sugar transporter signature 108 127 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1008 493 PRINTS Sugar transporter signature 282 292 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1008 493 PRINTS Sugar transporter signature 376 397 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1008 493 PRINTS Sugar transporter signature 399 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1008 493 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 7 485 IPR045262 GO:0015144
Apr7g1008 493 Gene3D MFS general substrate transporter like domains 6 479 IPR036259 -
Apr7g1008 493 TIGRFAM SP: MFS transporter, sugar porter (SP) family 11 471 IPR003663 GO:0016020|GO:0022857|GO:0055085
Apr7g1008 493 ProSitePatterns Sugar transport proteins signature 2. 113 138 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr7g1008 493 SUPERFAMILY MFS general substrate transporter 8 472 IPR036259 -
Apr7g1008 493 Pfam Sugar (and other) transporter 17 475 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr7g1008 493 ProSitePatterns Sugar transport proteins signature 1. 71 88 IPR005829 GO:0016021|GO:0022857|GO:0055085
Apr7g1008 493 PANTHER POLYOL TRANSPORTER 3-RELATED 7 485 - -
Apr7g1008 493 ProSiteProfiles Major facilitator superfamily (MFS) profile. 17 464 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1008 Apr-Chr7 17127335 17129469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1008 5 475 Organic Solute Cotransporters AT2G18480 72.669 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1008 - - gmx:102661233 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0266 3 5205513 5207474 Apr7g1008 7 17127335 17129469 PCT