Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2449 ATGGCTGGAATTGTTGTGGTTTTCGACTTCGACAAGACCATCATCGACTGTGATAGTGATAATTGGGTTGTTGACGAATTGGGCTTCAACGATTTGTTCAATCAGCTCCATCCCACCATGCCGTGGAACACTCTCATGGATAGGATGATGATGGAGCTTCATTTGCATGGAAAAACCAATGAGGAGATTGAGCAAGTTCTGCAGAGGATTCCTATACATCCCAGAGTAATCCCTTCCATTAAAGGTGCCCATGCTTTAGGGTGTGATTTGAGGATTGTAAGCGATGCAAACACGTTCTTCATCGAGACAATTTTGAAGCACTTAGGAATAAGGGAATGTTTCTCAGAGATTAACACTAACCCAGGTTATTTTAATGAAGAGGGAAGGCTAAGAATTTTGTCATACCATGACTCCAAAAAGTCTCCCCATGGCTGCTGCCTCTGCCCTCCGAATATGTGCAAGGGTCTAATCATAGATAAAATCCAAGACTCAATACTATGTTCAGGAGAAAAGAAGAGGTTCATCTATCTTGGGGATGGTAGTGCGGACTACTGCCCGAGCTTGAGGCTCAAAGACCTTGACTTTGTTATGCCAAGAAAGGACTTTCCGGTGTGGGACTTAATATGCAAAGACCCTTTGCATATTAAAGCTGAAATTCATGAATGGAGCGACGGAGAAGAGCTAGAACGAACTTTGCTGCACCTAATCAACAAAATTTCTTTGGAAGAAAGTGCTCAGTTTATTTCAGCCGATTGCAAGCTTCAAACTATATCTGCCTCTGCTCATGAAGCTTTTCCTCAAGCTCTACCAGTTCGGCAAAGATAA 825 0.4279 MAGIVVVFDFDKTIIDCDSDNWVVDELGFNDLFNQLHPTMPWNTLMDRMMMELHLHGKTNEEIEQVLQRIPIHPRVIPSIKGAHALGCDLRIVSDANTFFIETILKHLGIRECFSEINTNPGYFNEEGRLRILSYHDSKKSPHGCCLCPPNMCKGLIIDKIQDSILCSGEKKRFIYLGDGSADYCPSLRLKDLDFVMPRKDFPVWDLICKDPLHIKAEIHEWSDGEELERTLLHLINKISLEESAQFISADCKLQTISASAHEAFPQALPVRQR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2449 274 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 188 - -
Apr2g2449 274 Gene3D - 2 201 IPR023214 -
Apr2g2449 274 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 271 IPR016965 GO:0016791
Apr2g2449 274 Pfam Putative Phosphatase 4 236 IPR016965 GO:0016791
Apr2g2449 274 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 200 IPR006384 GO:0016791
Apr2g2449 274 SUPERFAMILY HAD-like 5 190 IPR036412 -
Apr2g2449 274 PANTHER INORGANIC PYROPHOSPHATASE 1 271 - -
Apr2g2449 274 PIRSF PLP_phosphatas_PHOSPHO2 1 240 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2449 Apr-Chr2 28974908 28976945 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2449 K13248 - gmx:100785878 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2449 2 28974908 28976945 Apr10g0978 10 22272571 22274782 ECH
Apr2g1339 2 19566764 19568400 Apr2g2449 2 28974908 28976945 ECH
Apr2g2449 2 28974908 28976945 Apr2g2449 2 28974908 28976945 ECH
Apr2g2449 2 28974908 28976945 Apr2g2449 2 28974908 28976945 PCT