Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g1339 ATGTGCGGAAGCGTGGCGGCGCCGGTGGTTGTTTTCGACTTTGATAGAACGATAATCGACGACGACAGTGACCGATGGGTGGTGACTGAAATGGGTTTGACCCACCTTTTCAACGAACTGCGCCACACCATGCCGTGGACCTCTCTGATGGACAGAATGACGGAGGAGCTGCACTCTCACGGGATCACCACTCACCACATTGTAGAGTGTCTGAAAAGGGTTCCTTTGCATCCAAGCACTGTTTCAGCCATCAAATCTGCACATGCTCTTGGGTGCGATTTGAGGATAATTAGCGATGCGAATCTGTTTTACATCCGGAACATTCTGGAACACCATGGCTTGTTAGAGTGCTTTTCTGAGCTGAATAGCAACCCAGCTTTTGTAGATGAAGAGGGACGCCTTCGTATCACACCCTTTCACCATTCTCCCCTCTCTCCTCACACTTGTCCCTTGTGCCCTTCCAATATGTGCAAGGGATTAGTAATAGACCGAATCCGAGGTTCTTTGCCGGATAAGAAAAGAAGATTCATCTACATCGGAGATGGAACAGGGGATTATTGCCCAACTTTGAAGCTGGGGGAAGATGATTTTGTGATGCCAAGGAAGAATTATCCCCTCTGGAACCGGATTTGTAGTGACCCAAAATTAGTTAATGCAAAGGTTCATGATTGGAGCAATGGGGAGGAGTTGAAGATCATACTACTCAACCTTATCAACATAGATCAAGCGGTAGCTAGCATCCCCCACTAA 750 0.476 MCGSVAAPVVVFDFDRTIIDDDSDRWVVTEMGLTHLFNELRHTMPWTSLMDRMTEELHSHGITTHHIVECLKRVPLHPSTVSAIKSAHALGCDLRIISDANLFYIRNILEHHGLLECFSELNSNPAFVDEEGRLRITPFHHSPLSPHTCPLCPSNMCKGLVIDRIRGSLPDKKRRFIYIGDGTGDYCPTLKLGEDDFVMPRKNYPLWNRICSDPKLVNAKVHDWSNGEELKIILLNLINIDQAVASIPH* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g1339 249 PIRSF PLP_phosphatas_PHOSPHO2 3 241 IPR016965 GO:0016791
Apr2g1339 249 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 8 202 IPR006384 GO:0016791
Apr2g1339 249 Pfam Putative Phosphatase 9 238 IPR016965 GO:0016791
Apr2g1339 249 Gene3D - 5 193 IPR023214 -
Apr2g1339 249 PANTHER PHOSPHATASE, ORPHAN 1, 2 8 239 IPR016965 GO:0016791
Apr2g1339 249 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 9 190 - -
Apr2g1339 249 SUPERFAMILY HAD-like 9 200 IPR036412 -
Apr2g1339 249 PANTHER THIAMINE PHOSPHATE PHOSPHATASE-LIKE PROTEIN 8 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g1339 Apr-Chr2 19566764 19568400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g1339 K13248 - gmx:100306472 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1339 2 19566764 19568400 Apr2g2449 2 28974908 28976945 ECH
Apr2g1339 2 19566764 19568400 Apr10g0978 10 22272571 22274782 ECH
Apr2g1339 2 19566764 19568400 Apr2g1339 2 19566764 19568400 ECH