Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0978 ATGGCTGGGATTGTAGTGATTTTTGACTTTGACTCCACAATCATCGAGTGTGATAGTGATAATTGGGTGCTTGATGAGACGGATTTAACTCAAAAGTTCTATAAGCTTCTTCCTAGCATGGCTTGGAACCCTCTAATGGATAGGATGATGAATGAACTTCATTCACAAGGAAAAACCATTGAAGAAATTGTAGAAATTCTGAACAGGACTCCAATGCATCCCCGCATTGTCCATGCTATTGAGGAAGCTTATTCCCTCGGATGTGACCTGAAGATTGTGAGTGATGCAAATATCTTCTTTATTGAGACAATTCTGAAGCATCATGGAGTGTGGAATTGTTTCTCAGAGGTCATTACCAACCCCAGCCATGTCAATGAAGGGAGGCTCAGTATTTTTCCCTACCATGATTATCTAAAATCTTCCCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGTTTGGTGATAGAAAGGATTCAGAGTTCCCTAGCAGCAGCAGGAAAGAAGAAACTAATCTACCTTGGAGATGGAAAAGGAGATTTTTGCCCTAGTTTGAAGCTCAAAGATAGGGACTATTTGATGCCTAGAATTGAATTTCCGTTGCGTGATTTAGTATCCAAAAATTCTAACAAGATAAAGGCAGAGGTACATGGTTGGAATGATGGACAAGAGCTTGAGCAAGTCTTGCTCCATATCATCAACAAAGCTAATGGTGATCAAGGAATCAACATTAACAATTCTACTCCTACAATTTCAGCTGATTGCAAATTGGGTTCAGCTCATCAACCTTTGCTTAAATCCCTCCCAGTTCCTCAATAA 822 0.4015 MAGIVVIFDFDSTIIECDSDNWVLDETDLTQKFYKLLPSMAWNPLMDRMMNELHSQGKTIEEIVEILNRTPMHPRIVHAIEEAYSLGCDLKIVSDANIFFIETILKHHGVWNCFSEVITNPSHVNEGRLSIFPYHDYLKSSHGCNLCPPNMCKGLVIERIQSSLAAAGKKKLIYLGDGKGDFCPSLKLKDRDYLMPRIEFPLRDLVSKNSNKIKAEVHGWNDGQELEQVLLHIINKANGDQGININNSTPTISADCKLGSAHQPLLKSLPVPQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0978 273 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Apr10g0978 273 Gene3D - 2 188 IPR023214 -
Apr10g0978 273 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Apr10g0978 273 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 186 - -
Apr10g0978 273 SUPERFAMILY HAD-like 5 184 IPR036412 -
Apr10g0978 273 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Apr10g0978 273 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 197 IPR006384 GO:0016791
Apr10g0978 273 PANTHER 2,3-DIKETO-5-METHYLTHIO-1-PHOSPHOPENTANE PHOSPHATASE 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0978 Apr-Chr10 22272571 22274782 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0978 K13248 - gmx:100785357 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2449 2 28974908 28976945 Apr10g0978 10 22272571 22274782 ECH
Apr2g1339 2 19566764 19568400 Apr10g0978 10 22272571 22274782 ECH
Apr10g0978 10 22272571 22274782 Apr10g0978 10 22272571 22274782 ECH