Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g2280 ATGGTATTAAATGTTGTTGATGGCCTTATCCGTCTCATGGAAGGACCCAACACTGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGATTGAACTTGCTGAGACAGTGAAAGAGCTTATTAATCCAAATGTGGAGATAAAGATGGTGGAGAACACTCCTGATGATCCACGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTTTTGGGCTGGGAACCAAAGGTGAAGTTGAGGGATGGTCTTCCTCTTATGGAAGATGATTTCCGTTTGAGGCTTGGAGTTGGCAAAAACAGTTAA 306 0.4183 MVLNVVDGLIRLMEGPNTGPINLGNPGEFTMIELAETVKELINPNVEIKMVENTPDDPRQRKPDITKAKEFLGWEPKVKLRDGLPLMEDDFRLRLGVGKNS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g2280 101 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 92 IPR036291 -
Apr2g2280 101 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 2 100 - -
Apr2g2280 101 Gene3D - 1 95 - -
Apr2g2280 101 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 2 100 IPR044516 GO:0042732|GO:0048040|GO:0070403
Apr2g2280 101 Pfam GDP-mannose 4,6 dehydratase 35 85 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g2280 Apr-Chr2 27839228 27843860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g2280 K08678 - gmx:100790835 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2280 2 27839228 27843860 Apr2g2280 2 27839228 27843860 ECH
Apr2g2280 2 27839228 27843860 Apr3g1461 3 29239364 29243985 ECH
Apr2g2280 2 27839228 27843860 Apr3g1460 3 29232847 29236854 PCT
Apr3g1461 3 29239364 29243985 Apr2g2280 2 27839228 27843860 PCT