Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g1460 ATGGCAGCGAATTCTTCTGATGGAGATCACCATACAACACTAAAGCAACCTCCCTTGCCATCTCCTTTACGTTTCTCCAAATTCTTTCAGTCCAACATGAGAATCTTGGTTACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAACGAGGTCATTGTTGCTGATAACTACTTCACTGGATCGAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTAATACGCCATGATGTCACTGAGCCTTTGATGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAAATGTGATAGGCACACTGAACATGCTTGGACTCGCAAAACGAGTTGGAGCAAGGATTTTACTTACATCAACTTCGGAGGTATATGGAGATCCTCTTGTGCATCCCCAACCTGAAAGCTATTGGGGCAATGTAAACCCTATTGGAGTTCGTAGTTGCTATGACGAGGGGAAGCGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCGTTGCAAGAATCTTTAACACATACGGGCCACGCATGAATATTGATGATGGACGTGTTGTAAGCAACTTCATTGCTCAAGCACTACGTGGTGAACCATTGACAGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTTGATGGGCTTATCCGTCTCATGGAGGGATCAGACACTGGGCCAATCAACCTTGGAAACCCAGGGGAATTTACAATGGTTGAACTGGCTGAAACTGTGAAGGAGCTTATAAATACGGATGTGAAGATAAATATAGTGGACAACACTCCTGATGATCCGCGACAGAGGAAACCAGACATAACGAAAGCAAAGGAATTGCTTAACTGGGAACCAAAGGTCAAGCTGCGAGATGGCCTTCCTCTTATGGAAGAGGATTTCCGGTTGAGGCTTGGAGTTGACAAAAAAAATTAA 1032 0.4351 MAANSSDGDHHTTLKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLMIEVDQIYHLACPASPIFYKYNPVKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMEGSDTGPINLGNPGEFTMVELAETVKELINTDVKINIVDNTPDDPRQRKPDITKAKELLNWEPKVKLRDGLPLMEEDFRLRLGVDKKN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g1460 343 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 343 - -
Apr3g1460 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 334 IPR036291 -
Apr3g1460 343 CDD UGD_SDR_e 33 334 - -
Apr3g1460 343 Pfam GDP-mannose 4,6 dehydratase 36 327 IPR016040 -
Apr3g1460 343 Gene3D - 32 336 - -
Apr3g1460 343 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 343 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g1460 Apr-Chr3 29232847 29236854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g1460 35 326 Miscellaneous Gene Families AT4G00110 24.233 1.54e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g1460 K08678 - gmx:100790835 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g2280 2 27839228 27843860 Apr3g1460 3 29232847 29236854 PCT