Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1370 ATGGAAGAAGCACCACAAAGGTATGCAGTTGTGACTGGTGCAAATAAAGGAATTGGACTAGAGATTGTGAGGCAGTTAGCTTCAGTTGGGATCAAGGTGGTGCTCACAGCAAGAAATGAGAAGAGAGGTCTTCAAGCATTGGAAAATCTAAAAGCCTCAGGTCTATCTGACCTTGTAGTGTTTCATCAGCTAGATGTGGCTGATGCTGCAAGTGTAACTCATTTGGCAAATTTTGTCAAATCTGAATTTGGAAAACTTGATATTCTGGAAGTATCTCAAGACGACAAGAAAAAGGCAATGACTCAAACATATGAGTTAGTTGAAGATTGCATTCAAATAAATTATTATGGGGCTAAAAGAACAACTGAAGCTCTTCTTCCTCTCCTCCTCCTATCTGATTCACCAAGAATTGTGAATGTATCATCCACATTGGGGAAGTTAGAGTTCATGACAAATGAAAGTGCTAAAGGAATCTTCAGTGATGCTGATAGCCTTACAGAAGAGAAGGTGGATGTAGTATTGAAGGAGTTTCTCAAAGATTTCAAAGAAGGGTCATTAGAAAGCAAAGGGTGGAGTGGTTTTAGTGTCTATAGTGTCTCTAAAGCTGCTATGAATGCCTATACTAGAATTCTCGCCAAGAAATACCCAACATTCTGCATCAATAGTGTTTGCCCTGGTTATGTCAAGACAGATATAACTGCTAACACTGGCATTTTAACAGTTGAAGAAGGTGCTGTTAGTCCTGTGAGGCTAGCACTGCTTCCTAATGGTAGTCCTTCTGGCCTGTTCTATCAGAGAAGTGAGGTGTCCTCCTTTTGA 819 0.4029 MEEAPQRYAVVTGANKGIGLEIVRQLASVGIKVVLTARNEKRGLQALENLKASGLSDLVVFHQLDVADAASVTHLANFVKSEFGKLDILEVSQDDKKKAMTQTYELVEDCIQINYYGAKRTTEALLPLLLLSDSPRIVNVSSTLGKLEFMTNESAKGIFSDADSLTEEKVDVVLKEFLKDFKEGSLESKGWSGFSVYSVSKAAMNAYTRILAKKYPTFCINSVCPGYVKTDITANTGILTVEEGAVSPVRLALLPNGSPSGLFYQRSEVSSF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1370 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 258 IPR036291 -
Apr10g1370 272 Pfam short chain dehydrogenase 189 235 IPR002347 -
Apr10g1370 272 Pfam short chain dehydrogenase 8 149 IPR002347 -
Apr10g1370 272 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 95 272 - -
Apr10g1370 272 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 89 - -
Apr10g1370 272 Gene3D - 2 90 - -
Apr10g1370 272 Gene3D - 91 272 - -
Apr10g1370 272 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Apr10g1370 272 PRINTS Glucose/ribitol dehydrogenase family signature 129 145 IPR002347 -
Apr10g1370 272 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Apr10g1370 272 PRINTS Glucose/ribitol dehydrogenase family signature 216 233 IPR002347 -
Apr10g1370 272 PANTHER SALUTARIDINE REDUCTASE-LIKE 95 272 - -
Apr10g1370 272 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1370 Apr-Chr10 25961943 25965007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1370 9 234 Miscellaneous Gene Families AT2G29150 27.273 2.41e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1370 K15095 - gmx:100801677 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g2204 4 31115742 31117713 Apr10g1370 10 25961943 25965007 PCT
Apr10g1370 10 25961943 25965007 Apr4g2205 4 31119803 31122227 PCT