Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1369 ATGGGAGAAACTAGAGAAAGGTATGCAGTTGTGACTGGAGCAAATAAAGGAATTGGATTAGAGATTTGTAGGCAATTAGCTTTAGCTGGGATCAAAGTGGTGCTTACAGCAAGAGATAAGAAAAGGGGTCTTCATGCACTGGAAACACTCAAAGATTCAGGTCTATCTCACCTTGTAGTTTTTCATCAGCTCGATGTGGCTGATCCTACAAGTGTCGCTTCTTTGGCAGATTTTGTCAAATCTAAGTTTGGGAAACTTGATTTGCTGGTAATATCAGAAGATGATGGGAGAAAGGCAATGACTCAAACTTATGAGCTAGCTGAAGAATGCCTGCAAATAAATTATTATGGTGCTAAAATAACTGTTGAATCCCTTATGCCCCTTCTCCAGTTGTCTGATTCACCAAGAATTGTTAATGTATCATCCAAACTGGGGCAATTAGAGAGTTTACCAAATGGATCATGGGCTAAAGGAGTCTTCAGTGATGCAGAAAATCTTACAGAAGAGAAAGTGGATGAAGTGTTGAAGGAGTTTCTCAAAGATTTCAAAGAAGGGTCATTGGAAAACAAAGGCTGGCCTAAGCATTTATGTGCGTACATTGTCTCTAAAGCTGCTATGAATGCCTATACTAGAATTCTTGCTAAGAATTACCCAACATTCTGCATCAATAGTGTTTGTCCTGGCTATGTCAAGACAGACATAACCGGCAACACCGGCTTCTTATCGGTCGAAGAAGGCGCCGTGGGTCCGGTGAGGCTAGCTCTACTTCCCAATGGTAGTGCTTCTGGCCTCTTCTATTACCGGAGTGACGTGTCTTCCTTTTGA 825 0.417 MGETRERYAVVTGANKGIGLEICRQLALAGIKVVLTARDKKRGLHALETLKDSGLSHLVVFHQLDVADPTSVASLADFVKSKFGKLDLLVISEDDGRKAMTQTYELAEECLQINYYGAKITVESLMPLLQLSDSPRIVNVSSKLGQLESLPNGSWAKGVFSDAENLTEEKVDEVLKEFLKDFKEGSLENKGWPKHLCAYIVSKAAMNAYTRILAKNYPTFCINSVCPGYVKTDITGNTGFLSVEEGAVGPVRLALLPNGSASGLFYYRSDVSSF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1369 274 Pfam short chain dehydrogenase 8 147 IPR002347 -
Apr10g1369 274 Gene3D - 2 274 - -
Apr10g1369 274 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 274 - -
Apr10g1369 274 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Apr10g1369 274 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Apr10g1369 274 PRINTS Glucose/ribitol dehydrogenase family signature 199 218 IPR002347 -
Apr10g1369 274 PRINTS Glucose/ribitol dehydrogenase family signature 218 235 IPR002347 -
Apr10g1369 274 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 274 - -
Apr10g1369 274 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 260 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1369 Apr-Chr10 25957328 25960060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1369 10 239 Acyl Lipid Metabolism Gene Families AT1G24360 22.689 1.76e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1369 K15095 - gmx:100804943 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1369 10 25957328 25960060 Apr10g1369 10 25957328 25960060 ECH
Apr4g2205 4 31119803 31122227 Apr10g1369 10 25957328 25960060 PCT
Apr10g1369 10 25957328 25960060 Apr4g2207 4 31126676 31128449 PCT