Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3667 ATGGTTCTAGGCATGAAAGCTAAGAACAGAAGAAGTGGAAGCATTCAAATTGATTACCTCATTCATCTTAAGGAGATTAAGCCATGGCCTCCAACACAATCCCTAAGATCCCTTCGTTCCGTACTCATTCAATGGAAGAATGGAGAATCTTCATCCGGTTGTACCAAACTCGTTTCTCCTTCACTCGGTTCCGTTATCGGCGAAGGTAAAATCGAATTCAACGAGTCGGTTAAACTTTCTGTTACGTTGTTAAGGGACGTGGCTGTTAGAGGCGGTGATGCTGACGTGTTCCAGAAGAATCTCTTGGACCTGAACTTGTACGAACCGCGACGCGAAAAGTCACAGTTGTTGGCATCTGGAACCATAGACTTGGCAAATTTTGTGATGCATAAGGAGAGATTCGAAGTTACTGTGCCTATGAACTGCAAGAGGAGCTACAGAAACACAGATCCGCCATTGCTGTTTGTTAAGATTCAGCGAGTAGAAAAGAGTCGCGGTAGCTCTTCCTTGAAGGACAGGTTTTCTACAGAGGATTGCAAGGAAAGAAACAATAGTAATGGTGGAGGCTCTGTTTCGGATTTGATTAGTGAAGAATATGCCGAGGAAGCTGAGATTGCTTCTTTCACTGATGATGATGACGATGAACACTCCTCACATTCATCGGAAAAGAATGGGGCAGATAGACAAATTTACAATACAAGTATGTATGAGAAGAAGAATTCCTTGGCTTCTGATGCTTCCATATCTCACTCTCTTAACCTTAATTCACTATCAACTCAAGAACGTGTTCTGGCACGTGCTGATTCAGATTCTTCATCCTCATCTTTAGTTTTTAGTTTTGATCTGAATTCTAAAAGCAGGACAAGAAACAGTGAAAATGAAAATTTGGATCAGAATGTTCATGAAAAGGTAGCTGCAGGTGTTCAAAGGAAGAGCAAAGAAAATGCTTCTATCATTATTAATTCAGGGAACACATTATCTCAAAGTAGTAGTGTTTACAAAGGCGAGAATCCTAGCTATGAAAACTGTGATAATTGTGAAAGCAATGAGAAATTAAATGGGAGATATGAGAAAGGAGATGAACAATTGGTAGCACAAGGTCCCAAAGATCAAGTCTCATTTGATAGTACTAAGGATTCTACTGACAGACTAAAGATCTTGCAGCTTGCGCAATCGCCAGCAGACTCAGCTTGGAAAACTGGATTGTTTGGTACAAATCACTATGTTGAAGTAAAGGAAAATGGTGGTCTTGGAGATTCAAGAAATAATGGAGGGAATGTCCGAAAGGTTTATTCAAAAGCAACAAGAAATGGTGGTTTAGATGGAAAAATGGAGCACTTGGAAATGAAGATAAAGAAGCTTGAAGGAGAGTTAAGAGAAGCAGCTGCTATTGAGGCTGCTTTGTATTCAGTGGTTGCTGAGCATGGAAACTCCATGAGTAAGGTCCATGCGCCGGCTCGGCGCCTTTCCAGGCTGTATCTTCATGCTTGCAAAGAAAATATTCAAGGAACAAGATCTGGTGCTGCTAAAAGTTCTGTTTCTGGATTAGTACTTGTTGTGAAGGCTTGTGGAAATGATGTCCCAAGGTTAACATTTTGGTTGTCTAATACTATAGTGTTGAGAACAATTATAAACCAATCCATCAAAGATTCAGTTCAATCAAATAATTCTGGAGTTATCCGCGGAAGGAAATACAACGGTGACTTGTACGGCAAGATAACCTCCACGGCTGCAAGATTGAAGGGATACCACCCTGCAAAAAATGAACATAGAGCAATAGGCTATGCAAGTTTTGGTAACTGGGAGGATCCACAGGTGTTCATATCAGCACTGGAAAAAGTGGAAGTTTGGATCTTCTCTCGCATTGTTGAATCTATTTGGTGGCAGACTCTGACTCCACATATGCAACCTATTGCTGCAAAATTGGCACAAAAGGAAGTGAATTCTGCCTCAAGAAAAAACAAGAGAGGAAAATCTAACTCATATGAGAAAGAGAAAGGGGAGGGGAACTTGCCACTTGATATTTGGAAGAAAGCATTCAAGGAAACCTGTGAAAGGCTCTGTCCTATTCGATCTGCAGGGCATGAGTGTGGTTGTTTGCCTATAATCCATAGATTGATAATGGAGCAATGCGTGGCAAGATTAGATGTGGCTATGTTCAATGCAATTCTTCGCAAGTCTTATGATGAAATCCCAACTGATCCTCTATCGGATCCCATTACTGATCCAAAGGTTCTTCCCATTCCACCTGGGAAATCAAGCTTTGGAGCTGGTGCACACTTAAAAACTGTGATTGGGACATGGTCTAGATGGTTGACTGACCTATTCGGCATGGATGACGACGACGACGATTCAGTAAAGGAAAAAGATGACAATGAAAAGAATAATGAGAGACAAATTACATCTTTCAAGTCCTTCAATCTTCTTAATGCACTTAGTGACCTTCTAATGCTTCCTAAGGACATGTTGTTAAGTGCATCAGTTAGGAAAGAGGTATGCCCAATGTTTAGTGCAACACTTATTAAGAAGATTCTAGACAGTTTTGTGCCAGATGAGTTTTGCACTGATCCAGTTCCCCCTACTGTTTTTGATGCTCTGAATTCAGAGAGTGATACACAGGAAGGAAACGAATCTGTCCTAAACTACCCATGCATTGCAGCTCCAATTATATATTTGCCTCCACCGGCAACTTCCATTGCAAGCATTGTTGGGGACTTTGGAAACAAATCTCAGTTGAGAAGAAGTAGATCTTGTGTTGTAAGTAAATCAAACACCAGTGACGATGAGCTCGAAGAATTGAAATGCCCACTATCCTCAATATTCTTCTTCAGTGGTTCCTTGTCCTCATCACAAGTTTCAGCTAAACCGAACTTGAAGTCAAAAGATGAATCTCCAGTTAGATATGAACTCCTCAGGGATATTTGGTTGAATAGTGAATAA 2940 0.4082 MVLGMKAKNRRSGSIQIDYLIHLKEIKPWPPTQSLRSLRSVLIQWKNGESSSGCTKLVSPSLGSVIGEGKIEFNESVKLSVTLLRDVAVRGGDADVFQKNLLDLNLYEPRREKSQLLASGTIDLANFVMHKERFEVTVPMNCKRSYRNTDPPLLFVKIQRVEKSRGSSSLKDRFSTEDCKERNNSNGGGSVSDLISEEYAEEAEIASFTDDDDDEHSSHSSEKNGADRQIYNTSMYEKKNSLASDASISHSLNLNSLSTQERVLARADSDSSSSSLVFSFDLNSKSRTRNSENENLDQNVHEKVAAGVQRKSKENASIIINSGNTLSQSSSVYKGENPSYENCDNCESNEKLNGRYEKGDEQLVAQGPKDQVSFDSTKDSTDRLKILQLAQSPADSAWKTGLFGTNHYVEVKENGGLGDSRNNGGNVRKVYSKATRNGGLDGKMEHLEMKIKKLEGELREAAAIEAALYSVVAEHGNSMSKVHAPARRLSRLYLHACKENIQGTRSGAAKSSVSGLVLVVKACGNDVPRLTFWLSNTIVLRTIINQSIKDSVQSNNSGVIRGRKYNGDLYGKITSTAARLKGYHPAKNEHRAIGYASFGNWEDPQVFISALEKVEVWIFSRIVESIWWQTLTPHMQPIAAKLAQKEVNSASRKNKRGKSNSYEKEKGEGNLPLDIWKKAFKETCERLCPIRSAGHECGCLPIIHRLIMEQCVARLDVAMFNAILRKSYDEIPTDPLSDPITDPKVLPIPPGKSSFGAGAHLKTVIGTWSRWLTDLFGMDDDDDDSVKEKDDNEKNNERQITSFKSFNLLNALSDLLMLPKDMLLSASVRKEVCPMFSATLIKKILDSFVPDEFCTDPVPPTVFDALNSESDTQEGNESVLNYPCIAAPIIYLPPPATSIASIVGDFGNKSQLRRSRSCVVSKSNTSDDELEELKCPLSSIFFFSGSLSSSQVSAKPNLKSKDESPVRYELLRDIWLNSE* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3667 979 MobiDBLite consensus disorder prediction 167 192 - -
Amo20g3667 979 MobiDBLite consensus disorder prediction 646 666 - -
Amo20g3667 979 ProSiteProfiles C2 NT-type domain profile. 7 162 IPR019448 -
Amo20g3667 979 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 979 - -
Amo20g3667 979 MobiDBLite consensus disorder prediction 648 666 - -
Amo20g3667 979 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 979 IPR021827 GO:0005643
Amo20g3667 979 MobiDBLite consensus disorder prediction 207 230 - -
Amo20g3667 979 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 142 IPR019448 -
Amo20g3667 979 Coils Coil 437 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3667 Amo-Chr20 147193126 147199599 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3667 - - adu:107471584 1800.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3174 16 135903501 135911565 Amo20g3667 20 147193126 147199599 PCT
Amo06g2594 06 89300821 89312784 Amo20g3667 20 147193126 147199599 PCT
Amo20g3667 20 147193126 147199599 Amo16g3174 16 135903501 135911565 PCT
Amo20g3667 20 147193126 147199599 Amo06g2594 06 89300821 89312784 PCT