Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3174 ATGGTTCTAGGCTCAAAAGGGAAGAACCGGAGAGGTGGCACCGTGCAAATCGATTGCCTTGTTCACATTCAAGAGATTAAGCCATGGCCCCCATCACAATCTCTCAAGTCCCTTCGTTCTGTGTTGATACAATGGGAGAACGGCGAGCGCTCTTCAGGGTCTACCAGTCCTGTTTCCCCAGGTGAAGGGAAAATTGAGTTTAATGAGTCATTTAGGCTTCATGTGACTCTGTTGAAGGACATGTCTGCCAAGCATAGTGTTGCTGATGTGTTCCAAAAGAATTACTTGGAGTTCAATTTGTATGAGCCTCGAAGAGATAAGATTGTTAAAGGTCAGTTGCTAGGAACTGCCATTGTAGACTTGGCAGATTGTGGCGTTCTTAAGGAGCCCTTGAGTGTTAGTGTTCCATTGAACTGCAAGAGGAACTACAGAAACACGGATCAGCCGCTTTTGTATGTTAAAATCGAGCCTACCGAAAAGCATCGGACTAGGTCCTCGTTCAAGGAAAGCAATCCCAAAGAGGCATCGAAGGACAACAAAGGTGGTGACTCTGTGTCTACATTGATGAATGAAGAATATGCTGAGGAAGCTGAGAGTGCTTCCTTTACTGATGATGATGTTTCCTCCCATTCATCTATTGTAGCAGCTACTACCCCAGAAACTAGTGGGAGTATACCTCCTCATTGTGCAGAGAATGGAGCACATGGAGCAACCCGAAACAAAGATAGTAATGAAAAGGAGCATACTTTGGCATCAGAAACAAAGGTTGAAAGATTGCAACAAGATACATGTGAGAAACTAGAGAGTTCATCTAATGCATCATCCGGAGATCTGTCCTCTAATATCGAAAGCCCGGCAAATGGTCAACCAGCTATGGAGAATACTAGTAATCACAGCCCAGTGACAATTCAAAAGCAAGTTGTTGATTCCTCCTCCCCATCCTTGGAGGAAAATTCCAAGAGCAGGTTCACAAACAGTGATCATGAAAATTTGGATCAGGAGGATTTTGAAGAGGATGCTAATTGTAGAAATAAATTTGAAGATGTTAAAACTAACAGTAATGGAAGTACTATTGATATCTATTCAAGGAACACTACATCTCTTAGTAATGGCTTTGTGGACATGACTCCAGGCTCTGTAAACTGTATTAGTTCAGAAATCAATGACAAATTGAATGAGCTGCATGGTGAAGCTGACGAATCTCACATGAAGGGGGAAGGAAGTGCTAAATCTTATTGTAGTTCTGTTGAGGACAGTAATGGAAATGAAATGTCTGATTTGGATATGCAAAACCATGTAGGAAATGAATCAATGGCTCATGGTGTGAAAGACCAAGTTTCATTAAGTAGCGATTTATACTATCTTGGTGGGTCAGAGAGTCATCTGAAAGGCAGTAATATTATGAGAAGTGAGAGATTAAAGCACGTGAAGTCGGTGAGGTCATCAACAGAATCAGCTAGGAGTATTGGATCACTCAGTAGCAATCATCTTTCTGAAGTAAGAGAAAGCCATATAGGAGATGCACAAAACAATGGAGGGAACATCCATGACAAAAGAGATGCTAAGATTTATCCAAGGGAATCCAGATCGACCATTTTTGACAGCAAGGTTGAGAATTTGGAAAACAAGATTAAGATGCTTGAGGGAGAGTTAAGAGAGGCTGCTGCCATTGAAGCTGCTTTATATTCAGTAGTTGCTGAGCATGGCAGCTCCATCAGTAAGGTTCATGCCCCAGCTCGGCGCCTGTCCAGGATGTACCTTCATGCTTGTAAAGAAAATATTCAAGCAAGAAGGTCTGGGGCTGCTAAAAGTGCTGTTTCAGGTTTAGCACTTGTTGCAAAAGCTTGTGGAAATGATGTCCCAAGATTGACATTTTGGTTATCTAATTCTATTGTGTTGAGAATAATTATAAGCCAATCCACCAGAGACATGGCACCATCAAGTCCTACCGGTTATAGTATGAGAAGGAAGAGAGCAGAGGGGAATGGAAAAATAGCTCAACCATTGGTATGGAAAGGTCTATCTGCTAGGAAAAGTGAGAAGACAGCATATGGTGCTTTTGGCAGCTGGGATGACCCAAATGTATTCATCTCAGCACTAGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCAATATGGTGGCAGTCTTTGACTCCGCATATGCAGCTTGCTGATGCGAAGTTCATCAGCAGGAATGACAGTTCTGCATCAAAGAAAAGCTTTAGAAGAATGTCTACCACATGTGACAAAGAGCAAGGGGATTTATCACTTGACATTTGGAAGAATGCTTTTAGAGAAGCCTGTGATAGGATCTGTCCCATTCGAGCTGGAGGGCATGAATGTGGCTGTTTGTCTCTTCTTCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTTGCAATGTTCAATGCCATCCTTCGTGAATCTGCTGACGACATCCCAACAGATCCTGTATCTGATCCCATTGGTGATCCTAAGGTCCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTGAAAACGGCGATTGGAAACTGGTCTAGATGGCTGACTGATCTATTTGGTATCGATGATGATGACGCGCTTGAAGATAAAGATGATGATGACCATTACAGCAGTGATGGAAGTCAAAATACATCATTCAAGGCCTTCCATCTTCTCAATGCACTAAGTGACCTCATGATGCTCCCTAAGGATATGCTGTTAAACGAATCCATCAGGAAAGAGGTGTGTCCCATGTTTAGTGCACCACTTATCAAGAAGATTCTGGAGAATTTTGTCCCGGATGAATTTTGCCCCGATCCAATTCCACCTGTTGTCTTTGAAGCTCTGGACTCACAGGATGATCTCGAAGATGGAAAGGAGTCTGTCAACTACTATCCATGCATTGCAGCTCCAATCGCATATTCACCTCCCCCTGCAACTTCCATTGCAAGCATTACGGCGGAAGTTGGAAGCGAATCTTACCTGAGAAGAAGTAAATCTTCCGTTATCAGGAAGTCATACACAAGTGACGATGAACTCGATGAATTAAGCTCTCCATTATCTTCTATATTATTTAATGGTTCCTCCTCTCCAGCATCAGTAAAACCCAACTGGAAGTTGAAGGATTGTCGCATTGAATCCAATGTCAGATATGAATTGCTCAGGGATGTCTGGAGGAATAGCGAGTAA 3201 0.4277 MVLGSKGKNRRGGTVQIDCLVHIQEIKPWPPSQSLKSLRSVLIQWENGERSSGSTSPVSPGEGKIEFNESFRLHVTLLKDMSAKHSVADVFQKNYLEFNLYEPRRDKIVKGQLLGTAIVDLADCGVLKEPLSVSVPLNCKRNYRNTDQPLLYVKIEPTEKHRTRSSFKESNPKEASKDNKGGDSVSTLMNEEYAEEAESASFTDDDVSSHSSIVAATTPETSGSIPPHCAENGAHGATRNKDSNEKEHTLASETKVERLQQDTCEKLESSSNASSGDLSSNIESPANGQPAMENTSNHSPVTIQKQVVDSSSPSLEENSKSRFTNSDHENLDQEDFEEDANCRNKFEDVKTNSNGSTIDIYSRNTTSLSNGFVDMTPGSVNCISSEINDKLNELHGEADESHMKGEGSAKSYCSSVEDSNGNEMSDLDMQNHVGNESMAHGVKDQVSLSSDLYYLGGSESHLKGSNIMRSERLKHVKSVRSSTESARSIGSLSSNHLSEVRESHIGDAQNNGGNIHDKRDAKIYPRESRSTIFDSKVENLENKIKMLEGELREAAAIEAALYSVVAEHGSSISKVHAPARRLSRMYLHACKENIQARRSGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRIIISQSTRDMAPSSPTGYSMRRKRAEGNGKIAQPLVWKGLSARKSEKTAYGAFGSWDDPNVFISALEKVEAWIFSRIVESIWWQSLTPHMQLADAKFISRNDSSASKKSFRRMSTTCDKEQGDLSLDIWKNAFREACDRICPIRAGGHECGCLSLLPRLIMEQCVARLDVAMFNAILRESADDIPTDPVSDPIGDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGIDDDDALEDKDDDDHYSSDGSQNTSFKAFHLLNALSDLMMLPKDMLLNESIRKEVCPMFSAPLIKKILENFVPDEFCPDPIPPVVFEALDSQDDLEDGKESVNYYPCIAAPIAYSPPPATSIASITAEVGSESYLRRSKSSVIRKSYTSDDELDELSSPLSSILFNGSSSPASVKPNWKLKDCRIESNVRYELLRDVWRNSE* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3174 1066 MobiDBLite consensus disorder prediction 217 339 - -
Amo16g3174 1066 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1066 - -
Amo16g3174 1066 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1066 IPR021827 GO:0005643
Amo16g3174 1066 MobiDBLite consensus disorder prediction 412 429 - -
Amo16g3174 1066 MobiDBLite consensus disorder prediction 154 185 - -
Amo16g3174 1066 MobiDBLite consensus disorder prediction 154 180 - -
Amo16g3174 1066 ProSiteProfiles C2 NT-type domain profile. 7 159 IPR019448 -
Amo16g3174 1066 MobiDBLite consensus disorder prediction 397 429 - -
Amo16g3174 1066 MobiDBLite consensus disorder prediction 238 264 - -
Amo16g3174 1066 MobiDBLite consensus disorder prediction 265 320 - -
Amo16g3174 1066 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 138 IPR019448 -
Amo16g3174 1066 Coils Coil 537 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3174 Amo-Chr16 135903501 135911565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3174 - - gmx:100783487 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3174 16 135903501 135911565 Amo16g3174 16 135903501 135911565 ECH
Amo16g3174 16 135903501 135911565 Amo06g2594 06 89300821 89312784 hybridization
Amo16g3174 16 135903501 135911565 Amo20g3667 20 147193126 147199599 PCT
Amo20g3667 20 147193126 147199599 Amo16g3174 16 135903501 135911565 PCT