Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2594 ATGGTTCTAGGCTCAAAAGGGAAGAACCGGAGAGGTGGCACCGTGCAAATCGATTGCCTTGTTCACATTCAAGAGATTAAGCCATGGCCCCCATCACAATCTCTCAAGTCCCTTCGTTCTGTGTTGATACAATGGGAGAACGGCGAGCGCTCTTCAGGGTCTACCAGTCCTGTTTCCCCAGGTGAAGGGAAAATTGAGTTTAATGAGTCATTTAGGCTTCATGTGACTCTGTTGAAGGACATGTCTGCCAAGCATAGTGTTGCTGATGTGTTTCAAAAGAATTACTTGGAGTTCAATTTGTATGAGCCTCGAAGAGATAAGATTGTTAAAGGTCAGTTGCTAGGAACTGCCATTGTAGACTTGGCAGATTGTGGCGTTCTTAAGGAGCCCTTGAGTGTTAGTGTTCCATTGAACTGCAAGAGGAACTACAGAAACACGGATCAGCCGCTTTTGTATGTTAAAATCGAGCCTACCGAAAAGCATCGGACTAGGTCCTCGTTCAAGGAAAGCAATCCCAAAGAGGCATCGAAGGACAACAAAGGTGGTGACTCTGTGTCTACATTGATGAATGAAGAATATGCTGAGGAAGCTGAGAGTGCTTCCTTTACTGATGATGATGTTTCCTCCCATTCATCTATTGTAGCAGCTACTACCCCAGAAACTAGTGGGAGTATACCTCCTCATTGTGCAGAGAATGGAGCACATGGAGCAACCCGAAACAAAGATAGTAATGAAAAGGAGCATACTTTGGCATCAGAAACAAAGGTTGAAAGATTGCAACAAGATACATGTGAGAAACTAGAGAGTTCATCTAATGCATCATCCGGAGATCTGTCCTCTAATATCGAAAGCCCGGCAAATGGTCAACCAGCTATGGAGAATACTAGTAATCACAGCCCAGTGACAATTCAAAAGCAAGTTGTTGATTCTTCCTCCCCATCCTTGGAGGAAAATTCCAAGAGCAGGTTCACAAACAGTGATCATGAAAATTTGGATCAGGAGGATTTTGAAGAGGATGCTAATTGTAGAAATAAATTTGAAGATGTTAAAACTAACAGTAATGGAAGTACTATTGATATCTATTCAAGGAACACTACATCTCTTAGTAATGGCTTTGTGGACATGACTCCAGGCTCTGTAAACTGTATTAGTTCAGAAATCAATGACAAATTGAATGAGCTGCATGGTGAAGCTGACGAATCTCACATGAAGGGGGAAGGAAGTGCTAAATCTTATTGTAGTTCTGTTGAGGACAGTAATGGAAATGAAATGTCTGATTTGGATATGCAAAACCATGTAGGAAATGAATCAATGGCTCATGGTGTGAAAGACCAAGTTTCATTAAGTAGCGATTTATACTATCTTGGTGGGTCAGAGAGTCATCTGAAAGGCAGTAATATTATGAGAAGTGAGAGATTAAAGCACGTGAAGTCGGTGAGGTCATCAACAGAATCAGCTAGGAGTATTGGATCACTCAGTAGCAATCATCTTTCTGAAGTAAGAGAAAGCCATATAGGAGATGCACAAAACAATGGAGGGAACATCCATGACAAAAGAGATGCTAAGATTTATCCAAGGGAATCCAGATCGACCATTTTTGACAGCAAGGTTGAGAATTTGGAAAACAAGATTAAGATGCTTGAGGGAGAGTTAAGAGAGGCTGCTGCCATTGAAGCTGCTTTATATTCAGTAGTTGCTGAGCATGGCAGCTCCATCAGTAAGGTTCATGCCCCAGCTCGGCGCCTGTCCAGGATGTACCTTCATGCTTGTAAAGAAAATATTCAAGCAAGAAGGTCTGGGGCTGCTAAAAGTGCTGTTTCAGGTTTAGCACTTGTTGCAAAAGCTTGTGGAAATGATGTCCCAAGATTGACATTTTGGTTATCTAATTCTATTGTGTTGAGAATAATTATAAGCCAATCCACCAGAGACATGGCYCCATCAAGTCCTACCGGTTATAGTATGAGAAGGAAGAGAGCAGAGGGGAATGGAAAAATAGCTCAACCATTGGTATGGAAAGGTCTATCTGCTAGGAAAAGTGAGAAGACAGCATATGGTGCTTTTGGCAGCTGGGATGACCCAAATGTATTCATCTCAGCACTAGAAAAGGTGGAAGCTTGGATCTTCTCTCGCATTGTGGAATCAATATGGTGGCAGTCTTTGACTCCGCATATGCAGCTTGCTGATGCGAAGTTCATCAGCAGGAATGACAGTTCTGCATCAAAGAAAAGCTTTAGAAGAATGTCTACCACATGTGACAAAGAGCAAGGGGATTTATCACTTGACATTTGGAAGAATGCTTTTAGAGAAGCCTGTGATAGGATCTGTCCCATTCGAGCTGGAGGGCATGAATGTGGCTGTTTGTCTCTTCTTCCTAGATTGATAATGGAGCAGTGTGTGGCAAGATTAGATGTTGCAATGTTCAATGCCATCCTTCGTGAATCTGCTGARGACATCCCAACYGATCCTGTATCTGATCCCATTGGTGATCCTAAGGTCCTCCCCATTCCACCTGGTAAATCAAGCTTTGGAGCTGGTGCACAGCTGAAAACGGCGATTGGAAACTGGTCTAGATGGCTGACTGATCTATTTGGTATCGATGATGATGACGCGCTTGAAGATAAAGATGATGATGACCATTACAGCAGTGATGGAAGTCAAAATACATCATTCAAGGCCTTCCATCTTCTCAATGCACTAAGTGACCTCATGATGCTCCCTAAGGATATGCTGTTAAACGAATCCATCAGGAAAGAGGTGTGTCCCATGTTTAGTGCACCACTTATCAAGAAGATTCTGGAGAATTTTGTCCCGGATGAATTTTGCCCCGATCCAATTCCACCTGTTGTCTTTGAAGCTCTGGACTCACAGGATGATCTCGAAGATGGAAATGAGTCTGTCAACTACTATCCATGCATTGCAGCTCCAATCGCATATTCACCTCCCCCTGCAACTTCCATTGCAAGCATTACCGCGGAAGTTGGAAGCGAATCTTACCTGAGAAGAAGTAAATCTTCCGTTATCAGGAAGTCATACACAAGTGACGATGAACTCGATGAATTAAGCTCTCCATTATCTTCTATATTATTTAATGGTTCTTCCTCCTCTCCAGCATCAGTAAAACCCAACTGGAAGTTGAAGGATTGTCGCATTGAATCCAATGTCAGATATGAATTGCTCAGGGATGTCTGGACGAATAGCGAGTAA 3204 0.4263 MVLGSKGKNRRGGTVQIDCLVHIQEIKPWPPSQSLKSLRSVLIQWENGERSSGSTSPVSPGEGKIEFNESFRLHVTLLKDMSAKHSVADVFQKNYLEFNLYEPRRDKIVKGQLLGTAIVDLADCGVLKEPLSVSVPLNCKRNYRNTDQPLLYVKIEPTEKHRTRSSFKESNPKEASKDNKGGDSVSTLMNEEYAEEAESASFTDDDVSSHSSIVAATTPETSGSIPPHCAENGAHGATRNKDSNEKEHTLASETKVERLQQDTCEKLESSSNASSGDLSSNIESPANGQPAMENTSNHSPVTIQKQVVDSSSPSLEENSKSRFTNSDHENLDQEDFEEDANCRNKFEDVKTNSNGSTIDIYSRNTTSLSNGFVDMTPGSVNCISSEINDKLNELHGEADESHMKGEGSAKSYCSSVEDSNGNEMSDLDMQNHVGNESMAHGVKDQVSLSSDLYYLGGSESHLKGSNIMRSERLKHVKSVRSSTESARSIGSLSSNHLSEVRESHIGDAQNNGGNIHDKRDAKIYPRESRSTIFDSKVENLENKIKMLEGELREAAAIEAALYSVVAEHGSSISKVHAPARRLSRMYLHACKENIQARRSGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRIIISQSTRDMAPSSPTGYSMRRKRAEGNGKIAQPLVWKGLSARKSEKTAYGAFGSWDDPNVFISALEKVEAWIFSRIVESIWWQSLTPHMQLADAKFISRNDSSASKKSFRRMSTTCDKEQGDLSLDIWKNAFREACDRICPIRAGGHECGCLSLLPRLIMEQCVARLDVAMFNAILRESAEDIPTDPVSDPIGDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGIDDDDALEDKDDDDHYSSDGSQNTSFKAFHLLNALSDLMMLPKDMLLNESIRKEVCPMFSAPLIKKILENFVPDEFCPDPIPPVVFEALDSQDDLEDGNESVNYYPCIAAPIAYSPPPATSIASITAEVGSESYLRRSKSSVIRKSYTSDDELDELSSPLSSILFNGSSSSPASVKPNWKLKDCRIESNVRYELLRDVWTNSE* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2594 1067 MobiDBLite consensus disorder prediction 217 339 - -
Amo06g2594 1067 MobiDBLite consensus disorder prediction 412 429 - -
Amo06g2594 1067 MobiDBLite consensus disorder prediction 154 185 - -
Amo06g2594 1067 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1067 - -
Amo06g2594 1067 MobiDBLite consensus disorder prediction 154 180 - -
Amo06g2594 1067 ProSiteProfiles C2 NT-type domain profile. 7 159 IPR019448 -
Amo06g2594 1067 MobiDBLite consensus disorder prediction 397 429 - -
Amo06g2594 1067 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1067 IPR021827 GO:0005643
Amo06g2594 1067 MobiDBLite consensus disorder prediction 238 264 - -
Amo06g2594 1067 MobiDBLite consensus disorder prediction 265 320 - -
Amo06g2594 1067 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 138 IPR019448 -
Amo06g2594 1067 Coils Coil 537 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2594 Amo-Chr6 89300821 89312784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2594 - - gmx:100783487 1344.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3174 16 135903501 135911565 Amo06g2594 06 89300821 89312784 hybridization
Amo06g2594 06 89300821 89312784 Amo20g3667 20 147193126 147199599 PCT
Amo20g3667 20 147193126 147199599 Amo06g2594 06 89300821 89312784 PCT